Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| natural killer cell | 6 studies | 16% ± 1% | |
| classical monocyte | 5 studies | 23% ± 5% | |
| epithelial cell | 4 studies | 29% ± 10% | |
| ciliated cell | 4 studies | 18% ± 3% | |
| non-classical monocyte | 3 studies | 24% ± 8% | |
| myeloid cell | 3 studies | 18% ± 2% | |
| GABAergic neuron | 3 studies | 20% ± 5% | |
| glutamatergic neuron | 3 studies | 27% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 1699.84 | 1445 / 1445 | 100% | 31.32 | 183 / 183 |
| ovary | 100% | 1773.49 | 180 / 180 | 100% | 37.80 | 430 / 430 |
| stomach | 100% | 1147.42 | 359 / 359 | 100% | 36.01 | 286 / 286 |
| skin | 100% | 2475.21 | 1809 / 1809 | 100% | 30.80 | 471 / 472 |
| uterus | 100% | 1866.72 | 170 / 170 | 100% | 37.10 | 458 / 459 |
| lung | 100% | 1237.10 | 576 / 578 | 100% | 28.38 | 1155 / 1155 |
| breast | 100% | 1709.65 | 459 / 459 | 100% | 35.70 | 1114 / 1118 |
| intestine | 100% | 1617.99 | 966 / 966 | 100% | 36.32 | 525 / 527 |
| bladder | 100% | 1733.14 | 21 / 21 | 100% | 31.56 | 502 / 504 |
| thymus | 100% | 1517.24 | 653 / 653 | 99% | 19.15 | 601 / 605 |
| brain | 99% | 1591.39 | 2621 / 2642 | 100% | 25.90 | 705 / 705 |
| prostate | 100% | 1570.78 | 245 / 245 | 99% | 17.65 | 497 / 502 |
| kidney | 100% | 1320.47 | 89 / 89 | 99% | 13.99 | 890 / 901 |
| liver | 100% | 914.13 | 226 / 226 | 97% | 13.50 | 394 / 406 |
| pancreas | 98% | 649.98 | 320 / 328 | 99% | 19.32 | 176 / 178 |
| adrenal gland | 100% | 1553.77 | 258 / 258 | 96% | 16.22 | 220 / 230 |
| adipose | 100% | 1539.14 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 100% | 18.79 | 80 / 80 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 29.71 | 29 / 29 |
| spleen | 100% | 2110.73 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 32.24 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 13.19 | 1 / 1 |
| blood vessel | 100% | 1246.04 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| muscle | 100% | 985.22 | 799 / 803 | 0% | 0 | 0 / 0 |
| heart | 98% | 890.72 | 840 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 97% | 1479.75 | 898 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0006913 | Biological process | nucleocytoplasmic transport |
| GO_0006406 | Biological process | mRNA export from nucleus |
| GO_0006405 | Biological process | RNA export from nucleus |
| GO_0060236 | Biological process | regulation of mitotic spindle organization |
| GO_0051301 | Biological process | cell division |
| GO_0000972 | Biological process | transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery |
| GO_0071407 | Biological process | cellular response to organic cyclic compound |
| GO_0097431 | Cellular component | mitotic spindle pole |
| GO_0001650 | Cellular component | fibrillar center |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0005643 | Cellular component | nuclear pore |
| GO_0005635 | Cellular component | nuclear envelope |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0005634 | Cellular component | nucleus |
| GO_0043130 | Molecular function | ubiquitin binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0008017 | Molecular function | microtubule binding |
| GO_0003723 | Molecular function | RNA binding |
| Gene name | RAE1 |
| Protein name | Alternative protein RAE1 Rae1 protein homolog (mRNA-associated protein mrnp 41) mRNA export factor RAE1 (Rae1 protein homolog) (mRNA-associated protein mrnp 41) Ribonucleic acid export 1 Ribonuclease A E1 (Ribonuclease, RNase A family, 7, isoform CRA_a) |
| Synonyms | hCG_2042981 MRNP41 RNASE7 |
| Description | FUNCTION: Acts as a mRNA export factor involved in nucleocytoplasmic transport . Plays a role in mitotic bipolar spindle formation . May function in attaching cytoplasmic mRNPs to the cytoskeleton both directly or indirectly . . |
| Accessions | ENST00000371242.6 ENST00000395840.6 E9PQ57 D3DS13 B0QZ36 P78406 B0QZ37 ENST00000429339.5 ENST00000492498.5 ENST00000452119.1 ENST00000395841.7 E9PPG9 ENST00000411894.5 ENST00000527947.5 L0R530 |
