Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2437.00 | 1445 / 1445 | 100% | 41.79 | 183 / 183 |
intestine | 100% | 2771.99 | 966 / 966 | 100% | 51.74 | 527 / 527 |
lung | 100% | 2472.03 | 578 / 578 | 100% | 36.43 | 1155 / 1155 |
ovary | 100% | 4091.19 | 180 / 180 | 100% | 30.63 | 430 / 430 |
skin | 100% | 3215.39 | 1809 / 1809 | 100% | 44.63 | 472 / 472 |
stomach | 100% | 2063.94 | 359 / 359 | 100% | 52.17 | 286 / 286 |
uterus | 100% | 3093.04 | 170 / 170 | 100% | 43.40 | 459 / 459 |
thymus | 100% | 2929.59 | 653 / 653 | 100% | 33.27 | 604 / 605 |
breast | 100% | 2849.45 | 459 / 459 | 100% | 38.77 | 1116 / 1118 |
prostate | 100% | 2777.75 | 245 / 245 | 100% | 28.88 | 501 / 502 |
bladder | 100% | 2843.57 | 21 / 21 | 100% | 44.33 | 502 / 504 |
kidney | 100% | 2017.87 | 89 / 89 | 99% | 22.83 | 896 / 901 |
pancreas | 100% | 1678.51 | 328 / 328 | 99% | 34.55 | 177 / 178 |
liver | 100% | 1069.41 | 225 / 226 | 99% | 18.84 | 400 / 406 |
brain | 99% | 1672.65 | 2606 / 2642 | 99% | 25.18 | 701 / 705 |
adrenal gland | 100% | 2122.78 | 258 / 258 | 97% | 20.64 | 224 / 230 |
adipose | 100% | 2713.65 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2495.54 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 49.84 | 29 / 29 |
spleen | 100% | 3218.63 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 32.03 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 13.48 | 1 / 1 |
muscle | 100% | 1821.58 | 801 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 1358.83 | 841 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 23.71 | 78 / 80 |
peripheral blood | 97% | 2310.00 | 900 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006364 | Biological process | rRNA processing |
GO_0005730 | Cellular component | nucleolus |
GO_0005694 | Cellular component | chromosome |
GO_0005515 | Molecular function | protein binding |
GO_0003724 | Molecular function | RNA helicase activity |
GO_0016887 | Molecular function | ATP hydrolysis activity |
GO_0005524 | Molecular function | ATP binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | DDX27 |
Protein name | DEAD-box helicase 27 DDX27 protein RNA helicase (EC 3.6.4.13) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.4.13) (DEAD box protein 27) |
Synonyms | PP3241 cPERP-F RHLP HSPC259 |
Description | FUNCTION: Probable ATP-dependent RNA helicase. Component of the nucleolar ribosomal RNA (rRNA) processing machinery that regulates 3' end formation of ribosomal 47S rRNA . . |
Accessions | ENST00000493252.2 A0A087X059 Q96GQ7 B7Z6D5 A0A087WYH5 Q3MI07 ENST00000618172.5 ENST00000462328.2 B3GQE6 |