Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 8 studies | 41% ± 27% | |
epithelial cell | 5 studies | 21% ± 5% | |
astrocyte | 5 studies | 32% ± 10% | |
microglial cell | 5 studies | 22% ± 4% | |
oligodendrocyte | 5 studies | 25% ± 6% | |
macrophage | 5 studies | 21% ± 4% | |
interneuron | 5 studies | 38% ± 22% | |
endothelial cell | 4 studies | 25% ± 6% | |
cardiac muscle cell | 4 studies | 28% ± 4% | |
GABAergic neuron | 4 studies | 56% ± 15% | |
oligodendrocyte precursor cell | 4 studies | 33% ± 6% | |
neuron | 3 studies | 26% ± 8% | |
retinal cone cell | 3 studies | 22% ± 3% | |
transit amplifying cell | 3 studies | 24% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1066.50 | 1445 / 1445 | 100% | 15.68 | 183 / 183 |
uterus | 100% | 698.74 | 170 / 170 | 100% | 12.88 | 459 / 459 |
breast | 100% | 711.64 | 459 / 459 | 100% | 11.47 | 1117 / 1118 |
thymus | 100% | 1402.94 | 653 / 653 | 100% | 9.78 | 604 / 605 |
intestine | 100% | 1582.89 | 966 / 966 | 100% | 15.39 | 526 / 527 |
bladder | 100% | 889.67 | 21 / 21 | 100% | 12.31 | 503 / 504 |
brain | 100% | 1005.30 | 2636 / 2642 | 100% | 12.86 | 705 / 705 |
prostate | 100% | 880.69 | 245 / 245 | 100% | 7.40 | 500 / 502 |
kidney | 100% | 1165.25 | 89 / 89 | 99% | 9.92 | 896 / 901 |
stomach | 99% | 723.65 | 357 / 359 | 100% | 14.21 | 286 / 286 |
lung | 99% | 870.14 | 573 / 578 | 100% | 12.29 | 1155 / 1155 |
pancreas | 99% | 614.80 | 324 / 328 | 100% | 8.92 | 178 / 178 |
adrenal gland | 100% | 950.59 | 258 / 258 | 99% | 9.26 | 227 / 230 |
liver | 100% | 878.76 | 226 / 226 | 98% | 7.15 | 396 / 406 |
skin | 99% | 976.96 | 1796 / 1809 | 98% | 11.61 | 461 / 472 |
ovary | 85% | 327.31 | 153 / 180 | 100% | 10.62 | 430 / 430 |
lymph node | 0% | 0 | 0 / 0 | 100% | 13.62 | 29 / 29 |
spleen | 100% | 1396.56 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 12.17 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.92 | 1 / 1 |
adipose | 99% | 692.99 | 1197 / 1204 | 0% | 0 | 0 / 0 |
heart | 98% | 1734.16 | 841 / 861 | 0% | 0 | 0 / 0 |
muscle | 98% | 813.94 | 784 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 94% | 465.27 | 1254 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 81% | 6.64 | 65 / 80 |
peripheral blood | 48% | 935.86 | 449 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0044528 | Biological process | regulation of mitochondrial mRNA stability |
GO_0000963 | Biological process | mitochondrial RNA processing |
GO_0000959 | Biological process | mitochondrial RNA metabolic process |
GO_0035770 | Cellular component | ribonucleoprotein granule |
GO_0005739 | Cellular component | mitochondrion |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | FASTKD1 |
Protein name | FAST kinase domains 1 FAST kinase domain-containing protein 1, mitochondrial FASTKD1 protein |
Synonyms | KIAA1800 |
Description | FUNCTION: Involved in the down-regulation of mitochondrial MT-ND3 mRNA levels which leads to decreased respiratory complex I abundance and activity. . |
Accessions | C9JMM4 ENST00000453153.7 [Q53R41-1] E7EW60 ENST00000453929.6 [Q53R41-2] Q05D57 ENST00000417376.5 Q53R41 ENST00000445210.1 ENST00000438035.5 C9JTP4 |