Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 13 studies | 29% ± 11% | |
peripheral blood | 12 studies | 30% ± 9% | |
intestine | 10 studies | 22% ± 9% | |
kidney | 6 studies | 25% ± 4% | |
eye | 6 studies | 23% ± 9% | |
pancreas | 4 studies | 45% ± 21% | |
uterus | 4 studies | 28% ± 16% | |
breast | 4 studies | 24% ± 5% | |
brain | 4 studies | 22% ± 3% | |
liver | 4 studies | 32% ± 19% | |
placenta | 3 studies | 26% ± 7% | |
bone marrow | 3 studies | 19% ± 4% | |
lymph node | 3 studies | 22% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3686.17 | 1445 / 1445 | 100% | 26.51 | 183 / 183 |
liver | 100% | 3242.92 | 226 / 226 | 100% | 49.73 | 406 / 406 |
pancreas | 100% | 2343.72 | 328 / 328 | 100% | 49.79 | 178 / 178 |
skin | 100% | 3057.99 | 1809 / 1809 | 100% | 73.86 | 472 / 472 |
uterus | 100% | 2911.31 | 170 / 170 | 100% | 60.22 | 459 / 459 |
brain | 100% | 3598.12 | 2639 / 2642 | 100% | 55.62 | 705 / 705 |
thymus | 100% | 4079.90 | 653 / 653 | 100% | 68.26 | 604 / 605 |
ovary | 100% | 2513.68 | 180 / 180 | 100% | 27.12 | 429 / 430 |
intestine | 100% | 3806.54 | 966 / 966 | 100% | 50.17 | 525 / 527 |
adrenal gland | 100% | 4460.00 | 258 / 258 | 100% | 43.06 | 229 / 230 |
kidney | 100% | 4138.76 | 89 / 89 | 100% | 48.94 | 897 / 901 |
prostate | 100% | 4387.96 | 245 / 245 | 99% | 87.42 | 499 / 502 |
stomach | 100% | 3094.16 | 359 / 359 | 99% | 41.44 | 284 / 286 |
bladder | 100% | 3891.29 | 21 / 21 | 99% | 60.98 | 499 / 504 |
lung | 100% | 3265.29 | 577 / 578 | 99% | 50.19 | 1145 / 1155 |
breast | 100% | 3748.53 | 459 / 459 | 98% | 44.50 | 1095 / 1118 |
adipose | 100% | 3757.94 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 49.45 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 123.60 | 29 / 29 |
spleen | 100% | 3921.13 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 61.64 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 47.56 | 1 / 1 |
blood vessel | 100% | 3368.66 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 2303.21 | 798 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 2670.01 | 855 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 96% | 1943.39 | 892 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0042274 | Biological process | ribosomal small subunit biogenesis |
GO_0005730 | Cellular component | nucleolus |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0032040 | Cellular component | small-subunit processome |
GO_0019899 | Molecular function | enzyme binding |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | RPS19BP1 |
Protein name | Active regulator of SIRT1 (40S ribosomal protein S19-binding protein 1) Active regulator of SIRT1 (40S ribosomal protein S19-binding protein 1) (RPS19-binding protein 1) (S19BP) |
Synonyms | AROS |
Description | FUNCTION: Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit. During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome. Acts as a chaperone that specifically mediates the integration of RPS19 in state post-A1 . Direct regulator of SIRT1. Enhances SIRT1-mediated deacetylation of p53/TP53, thereby participating in inhibition of p53/TP53-mediated transcriptional activity . . |
Accessions | ENST00000334678.8 ENST00000420879.5 Q86WX3 F8WFE7 |