Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 6 studies | 35% ± 16% | |
natural killer cell | 5 studies | 21% ± 4% | |
plasmablast | 4 studies | 40% ± 19% | |
ciliated cell | 4 studies | 29% ± 8% | |
abnormal cell | 4 studies | 23% ± 8% | |
CD8-positive, alpha-beta T cell | 4 studies | 23% ± 7% | |
pancreatic A cell | 3 studies | 23% ± 4% | |
hematopoietic precursor cell | 3 studies | 21% ± 4% | |
non-classical monocyte | 3 studies | 24% ± 5% | |
endothelial cell | 3 studies | 28% ± 8% | |
fibroblast | 3 studies | 25% ± 7% | |
erythroblast | 3 studies | 38% ± 15% | |
dendritic cell | 3 studies | 27% ± 6% | |
goblet cell | 3 studies | 22% ± 6% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 3 studies | 23% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1032.45 | 1445 / 1445 | 100% | 77.44 | 183 / 183 |
liver | 100% | 1301.38 | 226 / 226 | 100% | 94.15 | 406 / 406 |
ovary | 100% | 643.92 | 180 / 180 | 100% | 116.09 | 430 / 430 |
skin | 100% | 1808.09 | 1809 / 1809 | 100% | 123.40 | 472 / 472 |
uterus | 100% | 1012.00 | 170 / 170 | 100% | 145.96 | 459 / 459 |
brain | 100% | 1339.40 | 2635 / 2642 | 100% | 121.69 | 705 / 705 |
pancreas | 100% | 636.30 | 327 / 328 | 100% | 80.95 | 178 / 178 |
intestine | 100% | 962.37 | 966 / 966 | 100% | 121.86 | 525 / 527 |
adrenal gland | 100% | 1124.40 | 258 / 258 | 100% | 92.28 | 229 / 230 |
thymus | 100% | 675.26 | 650 / 653 | 100% | 82.07 | 604 / 605 |
kidney | 100% | 853.93 | 89 / 89 | 99% | 72.61 | 895 / 901 |
stomach | 100% | 767.77 | 359 / 359 | 99% | 99.27 | 284 / 286 |
prostate | 100% | 873.29 | 245 / 245 | 99% | 121.30 | 498 / 502 |
breast | 100% | 1018.95 | 459 / 459 | 99% | 114.98 | 1109 / 1118 |
bladder | 100% | 946.57 | 21 / 21 | 99% | 135.94 | 499 / 504 |
lung | 98% | 718.97 | 569 / 578 | 99% | 111.57 | 1147 / 1155 |
adipose | 100% | 906.13 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 87.99 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 146.77 | 29 / 29 |
spleen | 100% | 829.05 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 140.91 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 137.75 | 1 / 1 |
muscle | 100% | 1463.54 | 802 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 958.18 | 1331 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 758.60 | 840 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 91% | 702.97 | 843 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0001682 | Biological process | tRNA 5'-leader removal |
GO_0006364 | Biological process | rRNA processing |
GO_0008033 | Biological process | tRNA processing |
GO_0030681 | Cellular component | multimeric ribonuclease P complex |
GO_0000172 | Cellular component | ribonuclease MRP complex |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0005730 | Cellular component | nucleolus |
GO_0005655 | Cellular component | nucleolar ribonuclease P complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0033204 | Molecular function | ribonuclease P RNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0004526 | Molecular function | ribonuclease P activity |
GO_0003723 | Molecular function | RNA binding |
Gene name | POP7 |
Protein name | Ribonuclease P protein subunit p20 (RNaseP protein p20) (Ribonucleases P/MRP protein subunit POP7 homolog) (hPOP7) POP7 homolog, ribonuclease P/MRP subunit |
Synonyms | RPP20 |
Description | FUNCTION: Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends . Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences . . |
Accessions | ENST00000303151.5 C9JYM0 O75817 ENST00000457480.1 |