Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3148.20 | 1445 / 1445 | 100% | 28.13 | 183 / 183 |
lung | 100% | 3213.36 | 577 / 578 | 100% | 22.78 | 1155 / 1155 |
breast | 100% | 3590.20 | 459 / 459 | 100% | 34.42 | 1116 / 1118 |
ovary | 100% | 4307.66 | 180 / 180 | 100% | 21.68 | 429 / 430 |
brain | 100% | 2519.74 | 2637 / 2642 | 100% | 30.45 | 704 / 705 |
prostate | 100% | 3083.24 | 245 / 245 | 99% | 21.35 | 498 / 502 |
thymus | 100% | 4449.74 | 653 / 653 | 99% | 28.72 | 600 / 605 |
bladder | 100% | 3701.81 | 21 / 21 | 99% | 21.59 | 499 / 504 |
uterus | 100% | 4291.99 | 170 / 170 | 99% | 24.65 | 454 / 459 |
pancreas | 100% | 2074.28 | 327 / 328 | 99% | 21.01 | 176 / 178 |
stomach | 100% | 2685.22 | 359 / 359 | 98% | 22.43 | 281 / 286 |
kidney | 100% | 2378.36 | 89 / 89 | 98% | 21.15 | 882 / 901 |
intestine | 100% | 3485.21 | 966 / 966 | 98% | 20.56 | 514 / 527 |
adrenal gland | 100% | 3421.57 | 258 / 258 | 97% | 16.20 | 222 / 230 |
skin | 100% | 3571.00 | 1809 / 1809 | 93% | 24.66 | 437 / 472 |
liver | 100% | 1243.33 | 226 / 226 | 88% | 11.09 | 359 / 406 |
adipose | 100% | 3659.49 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3475.44 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 26.70 | 29 / 29 |
spleen | 100% | 4090.92 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 27.56 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 11.97 | 1 / 1 |
heart | 97% | 1564.94 | 833 / 861 | 0% | 0 | 0 / 0 |
muscle | 96% | 1095.24 | 768 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 81% | 2582.83 | 751 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 60% | 6.78 | 48 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0060809 | Biological process | mesodermal to mesenchymal transition involved in gastrulation |
GO_0097355 | Biological process | protein localization to heterochromatin |
GO_0045814 | Biological process | negative regulation of gene expression, epigenetic |
GO_0090309 | Biological process | positive regulation of DNA methylation-dependent heterochromatin formation |
GO_0045869 | Biological process | negative regulation of single stranded viral RNA replication via double stranded DNA intermediate |
GO_0008595 | Biological process | anterior/posterior axis specification, embryo |
GO_0000792 | Cellular component | heterochromatin |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005515 | Molecular function | protein binding |
GO_0003682 | Molecular function | chromatin binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | TASOR |
Protein name | Protein TASOR (CTCL tumor antigen se89-1) (Retinoblastoma-associated protein RAP140) (Transgene activation suppressor protein) Transcription activation suppressor |
Synonyms | KIAA1105 C3orf63 FAM208A |
Description | FUNCTION: Component of the HUSH complex, a multiprotein complex that mediates epigenetic repression . The HUSH complex is recruited to genomic loci rich in H3K9me3 and is required to maintain transcriptional silencing by promoting recruitment of SETDB1, a histone methyltransferase that mediates further deposition of H3K9me3, as well as MORC2 . Also represses L1 retrotransposons in collaboration with MORC2 and, probably, SETDB1, the silencing is dependent of repressive epigenetic modifications, such as H3K9me3 mark. Silencing events often occur within introns of transcriptionally active genes, and lead to the down-regulation of host gene expression . The HUSH complex is also involved in the silencing of unintegrated retroviral DNA by being recruited by ZNF638: some part of the retroviral DNA formed immediately after infection remains unintegrated in the host genome and is transcriptionally repressed . Plays a crucial role in early embryonic development (By similarity). Involved in the organization of spindle poles and spindle apparatus assembly during zygotic division (By similarity). Plays an important role in maintaining epiblast fitness or potency (By similarity). . |
Accessions | ENST00000614531.1 Q9UK61 ENST00000493960.6 [Q9UK61-3] ENST00000355628.9 [Q9UK61-4] A0A087X0F1 ENST00000683822.1 [Q9UK61-1] ENST00000431842.6 [Q9UK61-2] |