Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 13 studies | 26% ± 10% | |
type I pneumocyte | 9 studies | 26% ± 7% | |
glutamatergic neuron | 8 studies | 48% ± 24% | |
fibroblast | 8 studies | 20% ± 5% | |
neuron | 7 studies | 31% ± 12% | |
macrophage | 7 studies | 22% ± 5% | |
epithelial cell | 7 studies | 35% ± 13% | |
astrocyte | 7 studies | 32% ± 10% | |
oligodendrocyte | 7 studies | 29% ± 7% | |
retinal rod cell | 6 studies | 24% ± 6% | |
adipocyte | 6 studies | 22% ± 5% | |
ciliated cell | 6 studies | 26% ± 9% | |
GABAergic neuron | 6 studies | 44% ± 20% | |
interneuron | 5 studies | 44% ± 24% | |
microglial cell | 5 studies | 23% ± 4% | |
retina horizontal cell | 5 studies | 20% ± 3% | |
retinal cone cell | 5 studies | 28% ± 6% | |
oligodendrocyte precursor cell | 5 studies | 33% ± 12% | |
smooth muscle cell | 5 studies | 16% ± 0% | |
amacrine cell | 4 studies | 23% ± 1% | |
basal cell | 4 studies | 29% ± 10% | |
endothelial cell of lymphatic vessel | 4 studies | 22% ± 4% | |
ionocyte | 3 studies | 21% ± 5% | |
retinal ganglion cell | 3 studies | 19% ± 2% | |
myeloid cell | 3 studies | 16% ± 1% | |
retinal bipolar neuron | 3 studies | 21% ± 1% | |
retinal pigment epithelial cell | 3 studies | 28% ± 13% | |
rod bipolar cell | 3 studies | 26% ± 4% | |
hepatocyte | 3 studies | 38% ± 15% | |
myofibroblast cell | 3 studies | 20% ± 4% | |
granule cell | 3 studies | 27% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2723.73 | 1445 / 1445 | 100% | 8.15 | 183 / 183 |
stomach | 100% | 2265.58 | 359 / 359 | 100% | 6.71 | 285 / 286 |
lung | 100% | 2705.99 | 577 / 578 | 99% | 6.98 | 1149 / 1155 |
ovary | 100% | 3917.93 | 180 / 180 | 99% | 7.38 | 427 / 430 |
intestine | 100% | 3226.76 | 966 / 966 | 99% | 6.54 | 523 / 527 |
breast | 100% | 2810.01 | 459 / 459 | 99% | 8.97 | 1107 / 1118 |
pancreas | 100% | 2122.70 | 328 / 328 | 99% | 5.84 | 176 / 178 |
prostate | 100% | 3327.31 | 245 / 245 | 99% | 8.57 | 496 / 502 |
thymus | 100% | 3634.64 | 653 / 653 | 99% | 8.81 | 596 / 605 |
brain | 99% | 2306.65 | 2622 / 2642 | 99% | 7.50 | 698 / 705 |
bladder | 100% | 2873.00 | 21 / 21 | 98% | 6.21 | 494 / 504 |
uterus | 100% | 3429.34 | 170 / 170 | 98% | 6.96 | 449 / 459 |
skin | 100% | 3113.49 | 1808 / 1809 | 95% | 6.70 | 447 / 472 |
adrenal gland | 100% | 2732.07 | 258 / 258 | 92% | 5.15 | 212 / 230 |
kidney | 100% | 2091.79 | 89 / 89 | 91% | 5.26 | 823 / 901 |
liver | 100% | 2939.98 | 226 / 226 | 84% | 3.78 | 341 / 406 |
adipose | 100% | 2603.49 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2747.14 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 4.63 | 29 / 29 |
spleen | 100% | 1954.23 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.28 | 1 / 1 |
muscle | 100% | 1619.45 | 800 / 803 | 0% | 0 | 0 / 0 |
heart | 96% | 1537.12 | 825 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 5.84 | 41 / 45 |
eye | 0% | 0 | 0 / 0 | 76% | 3.34 | 61 / 80 |
peripheral blood | 43% | 799.43 | 399 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0043488 | Biological process | regulation of mRNA stability |
GO_0016607 | Cellular component | nuclear speck |
GO_0005730 | Cellular component | nucleolus |
GO_1990904 | Cellular component | ribonucleoprotein complex |
GO_0032839 | Cellular component | dendrite cytoplasm |
GO_1904115 | Cellular component | axon cytoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0008143 | Molecular function | poly(A) binding |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | ZC3H14 |
Protein name | Zinc finger CCCH domain-containing protein 14 Zinc finger CCCH-type containing 14 Zinc finger CCCH domain-containing protein 14 (Mammalian suppressor of tau pathology-2) (MSUT-2) (Renal carcinoma antigen NY-REN-37) |
Synonyms | hCG_21080 FLJ11806 |
Description | FUNCTION: Involved in poly(A) tail length control in neuronal cells. Binds the polyadenosine RNA oligonucleotides. . FUNCTION: Involved in poly(A) tail length control in neuronal cells. Binds the polyadenosine RNA oligonucleotides. . FUNCTION: Involved in poly(A) tail length control in neuronal cells. Binds the polyadenosine RNA oligonucleotides. . FUNCTION: Involved in poly(A) tail length control in neuronal cells. Binds the polyadenosine RNA oligonucleotides. . FUNCTION: Involved in poly(A) tail length control in neuronal cells. Binds the polyadenosine RNA oligonucleotides. . FUNCTION: Involved in poly(A) tail length control in neuronal cells. Binds the polyadenosine RNA oligonucleotides. . FUNCTION: Involved in poly(A) tail length control in neuronal cells. Binds the polyadenosine RNA oligonucleotides. . FUNCTION: Involved in poly(A) tail length control in neuronal cells. Binds the polyadenosine RNA oligonucleotides. . FUNCTION: Involved in poly(A) tail length control in neuronal cells. Binds the polyadenosine RNA oligonucleotides. . FUNCTION: Involved in poly(A) tail length control in neuronal cells. Binds the polyadenosine RNA oligonucleotides. . FUNCTION: Involved in poly(A) tail length control in neuronal cells. Binds the polyadenosine RNA oligonucleotides. . FUNCTION: Involved in poly(A) tail length control in neuronal cells. Binds the polyadenosine RNA oligonucleotides. . FUNCTION: Involved in poly(A) tail length control in neuronal cells. Binds the polyadenosine RNA oligonucleotides. . |
Accessions | ENST00000553495.5 ENST00000393514.9 [Q6PJT7-5] ENST00000556000.5 ENST00000557607.5 ENST00000557693.5 H0YJ87 ENST00000318308.10 [Q6PJT7-6] G3V3Y4 ENST00000649731.1 ENST00000251038.10 [Q6PJT7-1] G3V5I6 ENST00000555755.5 [Q6PJT7-9] G3V4R5 ENST00000336693.8 [Q6PJT7-4] G3V3R9 A0A3B3IT62 ENST00000556158.5 G3V256 Q6PJT7 ENST00000555120.1 G3V411 ENST00000555900.5 H0YJA2 ENST00000555792.1 G3V572 ENST00000406216.7 [Q6PJT7-8] ENST00000302216.12 [Q6PJT7-3] G3V473 A0A087WTC9 H0YJ51 G3V240 ENST00000556110.5 G3V2X4 ENST00000554602.5 ENST00000555799.5 ENST00000557737.1 ENST00000557047.2 ENST00000556945.5 |