Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 15 studies | 23% ± 8% | |
ciliated cell | 14 studies | 31% ± 15% | |
endothelial cell | 13 studies | 24% ± 8% | |
classical monocyte | 12 studies | 22% ± 10% | |
non-classical monocyte | 11 studies | 22% ± 9% | |
smooth muscle cell | 9 studies | 19% ± 4% | |
epithelial cell | 9 studies | 39% ± 18% | |
conventional dendritic cell | 8 studies | 25% ± 14% | |
pericyte | 8 studies | 18% ± 2% | |
epithelial cell of proximal tubule | 6 studies | 26% ± 5% | |
monocyte | 6 studies | 21% ± 8% | |
goblet cell | 6 studies | 25% ± 10% | |
basal cell | 6 studies | 33% ± 14% | |
astrocyte | 6 studies | 26% ± 10% | |
adipocyte | 6 studies | 22% ± 5% | |
abnormal cell | 6 studies | 21% ± 7% | |
kidney loop of Henle epithelial cell | 5 studies | 23% ± 4% | |
glutamatergic neuron | 5 studies | 37% ± 21% | |
microglial cell | 5 studies | 21% ± 6% | |
myeloid cell | 5 studies | 28% ± 10% | |
plasma cell | 5 studies | 35% ± 13% | |
enterocyte | 5 studies | 20% ± 4% | |
fibroblast | 5 studies | 28% ± 10% | |
neuron | 5 studies | 32% ± 16% | |
oligodendrocyte precursor cell | 5 studies | 25% ± 9% | |
pancreatic A cell | 4 studies | 31% ± 5% | |
retinal ganglion cell | 4 studies | 48% ± 27% | |
amacrine cell | 4 studies | 33% ± 13% | |
cardiac muscle cell | 4 studies | 22% ± 6% | |
GABAergic neuron | 4 studies | 35% ± 19% | |
transit amplifying cell | 4 studies | 22% ± 4% | |
interneuron | 4 studies | 30% ± 20% | |
oligodendrocyte | 4 studies | 25% ± 6% | |
secretory cell | 3 studies | 26% ± 15% | |
type B pancreatic cell | 3 studies | 28% ± 6% | |
hematopoietic precursor cell | 3 studies | 21% ± 6% | |
kidney distal convoluted tubule epithelial cell | 3 studies | 21% ± 5% | |
leukocyte | 3 studies | 18% ± 3% | |
retinal bipolar neuron | 3 studies | 38% ± 15% | |
myofibroblast cell | 3 studies | 19% ± 4% | |
dendritic cell | 3 studies | 57% ± 17% | |
type II pneumocyte | 3 studies | 29% ± 18% | |
retina horizontal cell | 3 studies | 30% ± 12% | |
retinal cone cell | 3 studies | 48% ± 14% | |
retinal rod cell | 3 studies | 28% ± 7% | |
Mueller cell | 3 studies | 24% ± 6% | |
rod bipolar cell | 3 studies | 31% ± 9% | |
erythroblast | 3 studies | 32% ± 15% | |
intermediate monocyte | 3 studies | 26% ± 10% | |
connective tissue cell | 3 studies | 21% ± 2% | |
enteroendocrine cell | 3 studies | 32% ± 13% | |
hepatocyte | 3 studies | 50% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 2192.52 | 21 / 21 | 100% | 24.38 | 504 / 504 |
breast | 100% | 2231.81 | 459 / 459 | 100% | 26.12 | 1118 / 1118 |
esophagus | 100% | 2560.90 | 1445 / 1445 | 100% | 14.44 | 183 / 183 |
intestine | 100% | 2549.88 | 966 / 966 | 100% | 20.36 | 527 / 527 |
liver | 100% | 2004.16 | 226 / 226 | 100% | 21.54 | 406 / 406 |
ovary | 100% | 2009.97 | 180 / 180 | 100% | 27.39 | 430 / 430 |
prostate | 100% | 2370.67 | 245 / 245 | 100% | 36.46 | 502 / 502 |
skin | 100% | 2339.88 | 1809 / 1809 | 100% | 26.80 | 472 / 472 |
stomach | 100% | 2083.99 | 359 / 359 | 100% | 18.96 | 286 / 286 |
thymus | 100% | 2205.23 | 653 / 653 | 100% | 24.82 | 605 / 605 |
uterus | 100% | 2026.79 | 170 / 170 | 100% | 23.62 | 459 / 459 |
brain | 100% | 2252.27 | 2641 / 2642 | 100% | 25.70 | 705 / 705 |
kidney | 100% | 2258.76 | 89 / 89 | 100% | 20.02 | 900 / 901 |
pancreas | 100% | 1700.70 | 327 / 328 | 100% | 17.80 | 178 / 178 |
adrenal gland | 100% | 2368.97 | 258 / 258 | 99% | 22.30 | 228 / 230 |
lung | 99% | 1729.55 | 573 / 578 | 100% | 19.41 | 1153 / 1155 |
adipose | 100% | 2382.06 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1966.70 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 39.96 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 20.02 | 29 / 29 |
muscle | 100% | 5815.07 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2097.89 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 19.78 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 36.25 | 1 / 1 |
heart | 100% | 4640.68 | 858 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 92% | 1114.48 | 858 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0042775 | Biological process | mitochondrial ATP synthesis coupled electron transport |
GO_0009060 | Biological process | aerobic respiration |
GO_0006120 | Biological process | mitochondrial electron transport, NADH to ubiquinone |
GO_0042776 | Biological process | proton motive force-driven mitochondrial ATP synthesis |
GO_0055085 | Biological process | transmembrane transport |
GO_0045271 | Cellular component | respiratory chain complex I |
GO_0005739 | Cellular component | mitochondrion |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0008137 | Molecular function | NADH dehydrogenase (ubiquinone) activity |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | NDUFV3 |
Protein name | NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial (Complex I-9kD) (CI-9kD) (NADH-ubiquinone oxidoreductase 9 kDa subunit) (Renal carcinoma antigen NY-REN-4) |
Synonyms | |
Description | FUNCTION: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. May be the terminally assembled subunit of Complex I. . |
Accessions | ENST00000340344.4 [P56181-1] ENST00000354250.7 [P56181-2] P56181 |