Insufficient scRNA-seq data for expression of RAVER1 at single-cell level.
Insufficient scRNA-seq data for expression of RAVER1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3405.33 | 1445 / 1445 | 100% | 37.89 | 183 / 183 |
ovary | 100% | 4322.90 | 180 / 180 | 100% | 40.10 | 428 / 430 |
stomach | 100% | 2830.43 | 359 / 359 | 99% | 35.48 | 283 / 286 |
intestine | 100% | 4372.94 | 966 / 966 | 99% | 29.19 | 520 / 527 |
skin | 100% | 3138.33 | 1808 / 1809 | 98% | 23.63 | 462 / 472 |
brain | 99% | 1637.78 | 2620 / 2642 | 98% | 19.81 | 688 / 705 |
lung | 100% | 3319.94 | 578 / 578 | 96% | 18.81 | 1111 / 1155 |
breast | 100% | 3149.12 | 459 / 459 | 94% | 15.01 | 1054 / 1118 |
bladder | 100% | 3727.10 | 21 / 21 | 93% | 17.85 | 469 / 504 |
prostate | 100% | 4279.71 | 245 / 245 | 92% | 14.48 | 463 / 502 |
pancreas | 100% | 1854.53 | 327 / 328 | 92% | 11.96 | 164 / 178 |
thymus | 100% | 3773.72 | 652 / 653 | 91% | 13.06 | 552 / 605 |
uterus | 100% | 4805.76 | 170 / 170 | 90% | 15.88 | 414 / 459 |
kidney | 100% | 3069.71 | 89 / 89 | 90% | 10.96 | 807 / 901 |
adrenal gland | 100% | 3151.23 | 258 / 258 | 83% | 10.20 | 191 / 230 |
liver | 100% | 1406.41 | 226 / 226 | 31% | 3.06 | 124 / 406 |
adipose | 100% | 2833.79 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 5512.55 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.34 | 1 / 1 |
blood vessel | 100% | 2983.38 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 1680.87 | 851 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 17.54 | 79 / 80 |
peripheral blood | 99% | 4287.80 | 916 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 20.26 | 43 / 45 |
muscle | 95% | 1094.18 | 764 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 72% | 20.12 | 21 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | RAVER1 |
Protein name | Ribonucleoprotein, PTB binding 1 Ribonucleoprotein PTB-binding 1 (Protein raver-1) |
Synonyms | KIAA1978 |
Description | FUNCTION: Cooperates with PTBP1 to modulate regulated alternative splicing events. Promotes exon skipping. Cooperates with PTBP1 to modulate switching between mutually exclusive exons during maturation of the TPM1 pre-mRNA (By similarity). . |
Accessions | A0A087WZ13 ENST00000617231.5 K7EKR9 ENST00000591969.2 Q8IY67 |