ZCRB1 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
fibroblast	19 studies	23% ± 11%	Explore
ciliated cell	15 studies	37% ± 15%	Explore
natural killer cell	13 studies	20% ± 6%	Explore
smooth muscle cell	13 studies	23% ± 4%	Explore
endothelial cell	12 studies	26% ± 11%	Explore
pericyte	12 studies	22% ± 5%	Explore
CD8-positive, alpha-beta T cell	10 studies	21% ± 4%	Explore
connective tissue cell	10 studies	24% ± 6%	Explore
regulatory T cell	10 studies	19% ± 3%	Explore
endothelial cell of lymphatic vessel	9 studies	23% ± 9%	Explore
B cell	8 studies	24% ± 6%	Explore
myofibroblast cell	8 studies	20% ± 3%	Explore
epithelial cell	8 studies	40% ± 23%	Explore
basal cell	7 studies	31% ± 16%	Explore
CD4-positive, alpha-beta T cell	7 studies	23% ± 6%	Explore
conventional dendritic cell	7 studies	26% ± 10%	Explore
plasmacytoid dendritic cell	7 studies	24% ± 8%	Explore
hematopoietic precursor cell	6 studies	32% ± 18%	Explore
macrophage	6 studies	24% ± 9%	Explore
CD16-negative, CD56-bright natural killer cell, human	6 studies	19% ± 5%	Explore
CD16-positive, CD56-dim natural killer cell, human	6 studies	18% ± 4%	Explore
kidney loop of Henle epithelial cell	6 studies	19% ± 3%	Explore
abnormal cell	6 studies	30% ± 8%	Explore
hematopoietic stem cell	6 studies	22% ± 5%	Explore
effector CD8-positive, alpha-beta T cell	5 studies	18% ± 2%	Explore
classical monocyte	5 studies	21% ± 6%	Explore
epithelial cell of proximal tubule	5 studies	20% ± 3%	Explore
T cell	5 studies	18% ± 2%	Explore
endothelial cell of artery	5 studies	18% ± 3%	Explore
gamma-delta T cell	5 studies	28% ± 18%	Explore
memory B cell	5 studies	17% ± 1%	Explore
CD8-positive, alpha-beta memory T cell	5 studies	21% ± 8%	Explore
secretory cell	4 studies	29% ± 17%	Explore
pancreatic A cell	4 studies	50% ± 7%	Explore
type B pancreatic cell	4 studies	53% ± 16%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	4 studies	20% ± 6%	Explore
non-classical monocyte	4 studies	28% ± 8%	Explore
exhausted T cell	4 studies	24% ± 11%	Explore
progenitor cell	4 studies	19% ± 4%	Explore
plasma cell	4 studies	29% ± 13%	Explore
club cell	4 studies	23% ± 6%	Explore
astrocyte	4 studies	24% ± 10%	Explore
neuron	4 studies	27% ± 14%	Explore
CD4-positive, alpha-beta memory T cell	4 studies	18% ± 3%	Explore
deuterosomal cell	3 studies	27% ± 4%	Explore
pancreatic D cell	3 studies	54% ± 16%	Explore
naive B cell	3 studies	20% ± 4%	Explore
effector memory CD8-positive, alpha-beta T cell	3 studies	23% ± 5%	Explore
mature NK T cell	3 studies	18% ± 3%	Explore
neural crest cell	3 studies	23% ± 0%	Explore
lymphocyte	3 studies	25% ± 9%	Explore
myeloid cell	3 studies	29% ± 13%	Explore
type II pneumocyte	3 studies	29% ± 18%	Explore
retinal cone cell	3 studies	48% ± 14%	Explore
retinal rod cell	3 studies	27% ± 9%	Explore
Mueller cell	3 studies	25% ± 7%	Explore
acinar cell	3 studies	40% ± 18%	Explore
erythroblast	3 studies	29% ± 9%	Explore
oligodendrocyte	3 studies	19% ± 3%	Explore
GABAergic neuron	3 studies	24% ± 3%	Explore
glutamatergic neuron	3 studies	33% ± 7%	Explore
dendritic cell	3 studies	45% ± 14%	Explore
pancreatic ductal cell	3 studies	51% ± 9%	Explore
granulocyte monocyte progenitor cell	3 studies	29% ± 10%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	39% ± 14%	Explore
goblet cell	3 studies	27% ± 6%	Explore
intestinal crypt stem cell	3 studies	21% ± 4%	Explore
luminal hormone-sensing cell of mammary gland	3 studies	19% ± 1%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	9 studies	27% ± 12%	Explore
kidney	7 studies	18% ± 2%	Explore
brain	6 studies	22% ± 5%	Explore
peripheral blood	5 studies	23% ± 8%	Explore
intestine	5 studies	22% ± 11%	Explore
pancreas	4 studies	49% ± 14%	Explore
uterus	4 studies	26% ± 16%	Explore
placenta	3 studies	22% ± 4%	Explore
eye	3 studies	33% ± 9%	Explore
thymus	3 studies	35% ± 14%	Explore
bone marrow	3 studies	19% ± 2%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	2107.13	459 / 459	100%	20.76	1118 / 1118
esophagus	100%	2159.18	1445 / 1445	100%	17.34	183 / 183
ovary	100%	1847.90	180 / 180	100%	25.77	430 / 430
pancreas	100%	1194.31	328 / 328	100%	13.06	178 / 178
prostate	100%	2088.24	245 / 245	100%	18.44	502 / 502
brain	100%	3383.40	2642 / 2642	100%	24.16	704 / 705
uterus	100%	1747.50	170 / 170	100%	17.04	458 / 459
kidney	100%	2068.99	89 / 89	100%	15.01	899 / 901
thymus	100%	1793.32	652 / 653	100%	17.90	604 / 605
bladder	100%	2223.52	21 / 21	100%	15.05	502 / 504
adrenal gland	100%	2235.10	258 / 258	99%	16.26	228 / 230
intestine	100%	2036.77	966 / 966	99%	13.61	522 / 527
stomach	100%	1969.89	359 / 359	99%	15.43	283 / 286
lung	99%	1428.72	571 / 578	100%	17.73	1154 / 1155
liver	97%	947.32	219 / 226	100%	11.07	404 / 406
skin	100%	1888.42	1802 / 1809	94%	12.67	446 / 472
adipose	100%	2174.20	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	15.72	29 / 29
muscle	100%	2575.95	803 / 803	0%	0	0 / 0
spleen	100%	1241.27	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	15.06	45 / 45
ureter	0%	0	0 / 0	100%	7.24	1 / 1
blood vessel	100%	2480.82	1333 / 1335	0%	0	0 / 0
heart	95%	1634.75	822 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	90%	8.72	72 / 80
peripheral blood	47%	1078.32	437 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0000398	Biological process	mRNA splicing, via spliceosome
GO_0008380	Biological process	RNA splicing
GO_0005654	Cellular component	nucleoplasm
GO_0005829	Cellular component	cytosol
GO_0005689	Cellular component	U12-type spliceosomal complex
GO_0005515	Molecular function	protein binding
GO_0008270	Molecular function	zinc ion binding
GO_0003723	Molecular function	RNA binding

IV. Literature review

[source]

Gene name	ZCRB1
Protein name	Zinc finger CCHC-type and RNA binding motif 1, isoform CRA_b (Zinc finger CCHC-type and RNA binding motif containing 1) Zinc finger CCHC-type and RNA-binding motif-containing protein 1 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein) (U11/U12 snRNP 31 kDa protein) (U11/U12-31K) Zinc finger CCHC-type and RNA-binding motif-containing protein 1 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein)
Synonyms	hCG_1818570
Description
Accessions	ENST00000679269.1 F8VXY6 ENST00000676501.1 Q05DR1 ENST00000552235.2 ENST00000677694.1 ENST00000266529.8 G3V1V1 ENST00000679184.1 ENST00000552673.5 Q8TBF4

ZCRB1 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review