Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 14 studies | 26% ± 6% | |
lung | 13 studies | 27% ± 11% | |
brain | 8 studies | 31% ± 17% | |
kidney | 7 studies | 21% ± 3% | |
intestine | 5 studies | 19% ± 6% | |
pancreas | 4 studies | 53% ± 18% | |
uterus | 4 studies | 26% ± 11% | |
breast | 4 studies | 18% ± 3% | |
liver | 4 studies | 28% ± 15% | |
placenta | 3 studies | 26% ± 6% | |
eye | 3 studies | 24% ± 6% | |
lymph node | 3 studies | 21% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 6592.21 | 1445 / 1445 | 100% | 94.17 | 183 / 183 |
liver | 100% | 4949.22 | 226 / 226 | 100% | 108.52 | 406 / 406 |
lung | 100% | 6046.47 | 578 / 578 | 100% | 136.12 | 1155 / 1155 |
prostate | 100% | 5726.65 | 245 / 245 | 100% | 145.89 | 502 / 502 |
stomach | 100% | 4374.31 | 359 / 359 | 100% | 97.82 | 286 / 286 |
uterus | 100% | 5992.07 | 170 / 170 | 100% | 120.66 | 459 / 459 |
brain | 100% | 5117.40 | 2640 / 2642 | 100% | 100.72 | 705 / 705 |
breast | 100% | 7577.81 | 459 / 459 | 100% | 164.14 | 1117 / 1118 |
kidney | 100% | 6473.25 | 89 / 89 | 100% | 133.81 | 900 / 901 |
intestine | 100% | 5630.80 | 966 / 966 | 100% | 112.85 | 526 / 527 |
ovary | 100% | 5787.03 | 180 / 180 | 100% | 78.87 | 429 / 430 |
thymus | 100% | 7189.38 | 653 / 653 | 100% | 166.44 | 603 / 605 |
adrenal gland | 100% | 7733.15 | 258 / 258 | 100% | 135.01 | 229 / 230 |
bladder | 100% | 6853.00 | 21 / 21 | 99% | 113.47 | 499 / 504 |
pancreas | 98% | 3206.33 | 320 / 328 | 100% | 124.15 | 178 / 178 |
skin | 100% | 6426.61 | 1809 / 1809 | 97% | 72.69 | 460 / 472 |
adipose | 100% | 7738.94 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 9829.84 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 113.43 | 29 / 29 |
muscle | 100% | 10908.65 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 4964.39 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 143.99 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 61.00 | 1 / 1 |
heart | 98% | 5431.95 | 845 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 96% | 4805.72 | 890 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 91% | 47.67 | 73 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0010629 | Biological process | negative regulation of gene expression |
GO_0030855 | Biological process | epithelial cell differentiation |
GO_0006914 | Biological process | autophagy |
GO_0005886 | Cellular component | plasma membrane |
GO_0012506 | Cellular component | vesicle membrane |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0042584 | Cellular component | chromaffin granule membrane |
GO_0062023 | Cellular component | collagen-containing extracellular matrix |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005544 | Molecular function | calcium-dependent phospholipid binding |
GO_0001786 | Molecular function | phosphatidylserine binding |
GO_0005178 | Molecular function | integrin binding |
GO_0048306 | Molecular function | calcium-dependent protein binding |
GO_0003723 | Molecular function | RNA binding |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | ANXA7 |
Protein name | Annexin A7 Annexin A7 (Annexin VII) (Annexin-7) (Synexin) |
Synonyms | ANX7 OK/SW-cl.95 SNX |
Description | FUNCTION: Calcium/phospholipid-binding protein which promotes membrane fusion and is involved in exocytosis. |
Accessions | B9ZVT2 ENST00000372919.8 [P20073-1] P20073 ENST00000394847.3 ENST00000372921.10 [P20073-2] |