Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 9 studies | 23% ± 7% | |
astrocyte | 8 studies | 33% ± 13% | |
microglial cell | 7 studies | 28% ± 11% | |
oligodendrocyte | 7 studies | 23% ± 7% | |
oligodendrocyte precursor cell | 7 studies | 37% ± 12% | |
ciliated cell | 6 studies | 24% ± 7% | |
GABAergic neuron | 5 studies | 29% ± 11% | |
epithelial cell | 5 studies | 37% ± 11% | |
conventional dendritic cell | 4 studies | 20% ± 4% | |
retinal rod cell | 4 studies | 19% ± 3% | |
macrophage | 4 studies | 21% ± 4% | |
glutamatergic neuron | 4 studies | 38% ± 15% | |
kidney loop of Henle epithelial cell | 3 studies | 20% ± 4% | |
retinal pigment epithelial cell | 3 studies | 36% ± 14% | |
fibroblast | 3 studies | 23% ± 4% | |
dendritic cell | 3 studies | 27% ± 6% | |
neural progenitor cell | 3 studies | 16% ± 0% | |
basal cell | 3 studies | 30% ± 13% | |
plasmacytoid dendritic cell | 3 studies | 20% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1198.36 | 2642 / 2642 | 100% | 13.01 | 704 / 705 |
liver | 100% | 1230.15 | 226 / 226 | 100% | 10.92 | 404 / 406 |
intestine | 100% | 790.37 | 966 / 966 | 99% | 10.44 | 524 / 527 |
esophagus | 100% | 800.87 | 1444 / 1445 | 99% | 7.12 | 182 / 183 |
stomach | 100% | 639.48 | 358 / 359 | 100% | 9.68 | 285 / 286 |
lung | 99% | 729.12 | 574 / 578 | 100% | 7.95 | 1151 / 1155 |
prostate | 100% | 745.95 | 245 / 245 | 99% | 9.29 | 496 / 502 |
ovary | 99% | 561.87 | 179 / 180 | 99% | 8.57 | 426 / 430 |
uterus | 100% | 718.69 | 170 / 170 | 98% | 7.17 | 452 / 459 |
bladder | 100% | 809.00 | 21 / 21 | 98% | 9.72 | 496 / 504 |
breast | 100% | 1013.45 | 459 / 459 | 98% | 7.99 | 1100 / 1118 |
thymus | 100% | 957.00 | 653 / 653 | 98% | 6.70 | 594 / 605 |
skin | 100% | 930.23 | 1805 / 1809 | 98% | 7.47 | 461 / 472 |
pancreas | 98% | 510.28 | 320 / 328 | 99% | 5.84 | 176 / 178 |
adrenal gland | 100% | 2329.71 | 258 / 258 | 96% | 8.20 | 220 / 230 |
kidney | 100% | 1227.11 | 89 / 89 | 93% | 6.02 | 840 / 901 |
adipose | 100% | 961.39 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 9.11 | 29 / 29 |
muscle | 100% | 2109.73 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 639.34 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 6.85 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.00 | 1 / 1 |
blood vessel | 100% | 807.89 | 1329 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 1457.82 | 844 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 11.29 | 75 / 80 |
peripheral blood | 38% | 454.97 | 355 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0032543 | Biological process | mitochondrial translation |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0005763 | Cellular component | mitochondrial small ribosomal subunit |
GO_0003723 | Molecular function | RNA binding |
Gene name | MRPS28 |
Protein name | Mitochondrial ribosomal protein S28 isoform 1 Mitochondrial ribosomal protein S28 isoform 4 (Mitochondrial ribosomal protein S28, isoform CRA_c) Mitochondrial ribosomal protein S28 Small ribosomal subunit protein bS1m (28S ribosomal protein S28, mitochondrial) (MRP-S28) (S28mt) (28S ribosomal protein S35, mitochondrial) (MRP-S35) (S35mt) Mitochondrial ribosomal protein S28 isoform 2 (Mitochondrial ribosomal protein S28, isoform CRA_b) |
Synonyms | HSPC007 MRPS35 hCG_20836 |
Description | |
Accessions | ENST00000519386.5 E5RFT8 E5RGC7 ENST00000518371.2 ENST00000276585.9 A0A0S2Z5D2 ENST00000520946.1 Q9Y2Q9 A0A0S2Z563 H0YAT2 ENST00000521605.1 A0A0S2Z5H0 ENST00000521434.5 ENST00000518271.1 U3KQQ8 E5RFH3 E5RK86 ENST00000519120.1 H7C5V3 |