Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 49 studies | 47% ± 19% | |
fibroblast | 34 studies | 27% ± 12% | |
smooth muscle cell | 24 studies | 25% ± 8% | |
macrophage | 22 studies | 24% ± 8% | |
endothelial cell of lymphatic vessel | 22 studies | 36% ± 11% | |
pericyte | 22 studies | 27% ± 9% | |
astrocyte | 17 studies | 38% ± 19% | |
basal cell | 16 studies | 31% ± 16% | |
oligodendrocyte | 16 studies | 50% ± 18% | |
capillary endothelial cell | 16 studies | 43% ± 17% | |
endothelial cell of vascular tree | 15 studies | 47% ± 15% | |
oligodendrocyte precursor cell | 14 studies | 37% ± 17% | |
endothelial cell of artery | 14 studies | 48% ± 18% | |
vein endothelial cell | 13 studies | 49% ± 11% | |
type I pneumocyte | 12 studies | 50% ± 14% | |
myofibroblast cell | 11 studies | 28% ± 10% | |
connective tissue cell | 10 studies | 33% ± 12% | |
microglial cell | 10 studies | 30% ± 15% | |
ciliated cell | 10 studies | 30% ± 13% | |
mast cell | 9 studies | 21% ± 6% | |
epithelial cell | 9 studies | 44% ± 25% | |
GABAergic neuron | 8 studies | 51% ± 20% | |
epithelial cell of proximal tubule | 8 studies | 23% ± 5% | |
myeloid cell | 8 studies | 34% ± 15% | |
adipocyte | 8 studies | 26% ± 8% | |
type II pneumocyte | 7 studies | 26% ± 8% | |
mesothelial cell | 7 studies | 27% ± 12% | |
glutamatergic neuron | 7 studies | 43% ± 21% | |
glial cell | 7 studies | 38% ± 20% | |
interneuron | 7 studies | 48% ± 25% | |
retinal rod cell | 7 studies | 24% ± 8% | |
neuron | 6 studies | 40% ± 18% | |
retinal ganglion cell | 6 studies | 37% ± 22% | |
club cell | 6 studies | 25% ± 6% | |
alveolar macrophage | 6 studies | 22% ± 7% | |
dendritic cell | 6 studies | 32% ± 13% | |
conventional dendritic cell | 5 studies | 25% ± 6% | |
progenitor cell | 5 studies | 23% ± 10% | |
abnormal cell | 5 studies | 34% ± 13% | |
plasma cell | 5 studies | 26% ± 10% | |
retina horizontal cell | 5 studies | 33% ± 10% | |
retinal cone cell | 5 studies | 31% ± 15% | |
cardiac muscle cell | 5 studies | 27% ± 4% | |
Mueller cell | 5 studies | 30% ± 5% | |
hepatocyte | 5 studies | 48% ± 30% | |
pancreatic A cell | 4 studies | 32% ± 14% | |
classical monocyte | 4 studies | 25% ± 2% | |
glomerular endothelial cell | 4 studies | 48% ± 11% | |
kidney loop of Henle epithelial cell | 4 studies | 18% ± 2% | |
podocyte | 4 studies | 51% ± 11% | |
retinal bipolar neuron | 4 studies | 28% ± 10% | |
amacrine cell | 4 studies | 35% ± 11% | |
OFF-bipolar cell | 4 studies | 24% ± 4% | |
ON-bipolar cell | 4 studies | 22% ± 4% | |
secretory cell | 4 studies | 35% ± 12% | |
monocyte | 4 studies | 21% ± 5% | |
type B pancreatic cell | 3 studies | 43% ± 21% | |
kidney distal convoluted tubule epithelial cell | 3 studies | 29% ± 4% | |
neural crest cell | 3 studies | 41% ± 10% | |
GABAergic interneuron | 3 studies | 29% ± 8% | |
extravillous trophoblast | 3 studies | 29% ± 8% | |
placental villous trophoblast | 3 studies | 31% ± 10% | |
retinal pigment epithelial cell | 3 studies | 58% ± 9% | |
lymphocyte | 3 studies | 33% ± 9% | |
glycinergic amacrine cell | 3 studies | 19% ± 4% | |
rod bipolar cell | 3 studies | 28% ± 0% | |
endothelial cell of sinusoid | 3 studies | 46% ± 12% | |
muscle cell | 3 studies | 39% ± 19% | |
pancreatic ductal cell | 3 studies | 44% ± 20% | |
neural progenitor cell | 3 studies | 44% ± 17% | |
ependymal cell | 3 studies | 47% ± 10% | |
megakaryocyte-erythroid progenitor cell | 3 studies | 34% ± 12% | |
Schwann cell | 3 studies | 39% ± 16% | |
melanocyte | 3 studies | 37% ± 11% | |
myoepithelial cell | 3 studies | 22% ± 10% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 19 studies | 35% ± 20% | |
lung | 13 studies | 29% ± 9% | |
eye | 9 studies | 30% ± 13% | |
kidney | 7 studies | 23% ± 5% | |
liver | 5 studies | 37% ± 22% | |
intestine | 4 studies | 31% ± 11% | |
heart | 4 studies | 27% ± 2% | |
pancreas | 3 studies | 42% ± 17% | |
peripheral blood | 3 studies | 18% ± 2% | |
placenta | 3 studies | 30% ± 8% | |
uterus | 3 studies | 32% ± 16% | |
adipose | 3 studies | 25% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 4780.84 | 2639 / 2642 | 100% | 94.88 | 703 / 705 |
ovary | 100% | 5821.71 | 180 / 180 | 98% | 24.44 | 420 / 430 |
lung | 100% | 5583.65 | 577 / 578 | 97% | 35.64 | 1115 / 1155 |
thymus | 100% | 5719.65 | 653 / 653 | 96% | 33.89 | 579 / 605 |
kidney | 100% | 3992.52 | 89 / 89 | 95% | 42.67 | 858 / 901 |
prostate | 100% | 3315.00 | 244 / 245 | 95% | 26.23 | 479 / 502 |
breast | 100% | 4867.61 | 459 / 459 | 94% | 27.69 | 1052 / 1118 |
adrenal gland | 100% | 32897.94 | 258 / 258 | 94% | 42.97 | 216 / 230 |
uterus | 100% | 4176.15 | 170 / 170 | 93% | 28.38 | 429 / 459 |
liver | 100% | 3879.05 | 226 / 226 | 92% | 26.61 | 372 / 406 |
skin | 99% | 4458.59 | 1791 / 1809 | 92% | 45.65 | 433 / 472 |
pancreas | 99% | 2632.38 | 325 / 328 | 91% | 22.71 | 162 / 178 |
esophagus | 100% | 4717.06 | 1445 / 1445 | 86% | 26.49 | 157 / 183 |
bladder | 100% | 4109.67 | 21 / 21 | 78% | 25.62 | 391 / 504 |
stomach | 100% | 3128.15 | 358 / 359 | 59% | 10.59 | 169 / 286 |
intestine | 93% | 3723.34 | 902 / 966 | 42% | 7.96 | 222 / 527 |
adipose | 100% | 6002.12 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 5030.51 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 8524.72 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3199.13 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 20.54 | 1 / 1 |
heart | 98% | 3807.89 | 841 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 19.67 | 41 / 45 |
lymph node | 0% | 0 | 0 / 0 | 69% | 13.14 | 20 / 29 |
eye | 0% | 0 | 0 / 0 | 46% | 10.42 | 37 / 80 |
peripheral blood | 21% | 1401.71 | 199 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0034111 | Biological process | negative regulation of homotypic cell-cell adhesion |
GO_1900027 | Biological process | regulation of ruffle assembly |
GO_0034260 | Biological process | negative regulation of GTPase activity |
GO_0072659 | Biological process | protein localization to plasma membrane |
GO_0051016 | Biological process | barbed-end actin filament capping |
GO_0032231 | Biological process | regulation of actin filament bundle assembly |
GO_2000643 | Biological process | positive regulation of early endosome to late endosome transport |
GO_0010628 | Biological process | positive regulation of gene expression |
GO_0097067 | Biological process | cellular response to thyroid hormone stimulus |
GO_0010737 | Biological process | protein kinase A signaling |
GO_0045176 | Biological process | apical protein localization |
GO_1902966 | Biological process | positive regulation of protein localization to early endosome |
GO_1903392 | Biological process | negative regulation of adherens junction organization |
GO_1900087 | Biological process | positive regulation of G1/S transition of mitotic cell cycle |
GO_0045732 | Biological process | positive regulation of protein catabolic process |
GO_1902115 | Biological process | regulation of organelle assembly |
GO_0032487 | Biological process | regulation of Rap protein signal transduction |
GO_0030335 | Biological process | positive regulation of cell migration |
GO_0043087 | Biological process | regulation of GTPase activity |
GO_0008360 | Biological process | regulation of cell shape |
GO_0061028 | Biological process | establishment of endothelial barrier |
GO_0008361 | Biological process | regulation of cell size |
GO_0061951 | Biological process | establishment of protein localization to plasma membrane |
GO_0045792 | Biological process | negative regulation of cell size |
GO_0036120 | Biological process | cellular response to platelet-derived growth factor stimulus |
GO_0005902 | Cellular component | microvillus |
GO_0016324 | Cellular component | apical plasma membrane |
GO_0005615 | Cellular component | extracellular space |
GO_0030496 | Cellular component | midbody |
GO_0005886 | Cellular component | plasma membrane |
GO_0051286 | Cellular component | cell tip |
GO_0070062 | Cellular component | extracellular exosome |
GO_0030864 | Cellular component | cortical actin cytoskeleton |
GO_0005925 | Cellular component | focal adhesion |
GO_0030175 | Cellular component | filopodium |
GO_0030315 | Cellular component | T-tubule |
GO_0005912 | Cellular component | adherens junction |
GO_0071944 | Cellular component | cell periphery |
GO_0120044 | Cellular component | stereocilium base |
GO_0032154 | Cellular component | cleavage furrow |
GO_0030027 | Cellular component | lamellipodium |
GO_0045177 | Cellular component | apical part of cell |
GO_0045296 | Molecular function | cadherin binding |
GO_0051117 | Molecular function | ATPase binding |
GO_0003723 | Molecular function | RNA binding |
GO_0050839 | Molecular function | cell adhesion molecule binding |
GO_0051018 | Molecular function | protein kinase A binding |
GO_0005515 | Molecular function | protein binding |
GO_0003779 | Molecular function | actin binding |
Gene name | RDX |
Protein name | Radixin |
Synonyms | hCG_39182 |
Description | FUNCTION: Probably plays a crucial role in the binding of the barbed end of actin filaments to the plasma membrane. FUNCTION: Probably plays a crucial role in the binding of the barbed end of actin filaments to the plasma membrane. . FUNCTION: Probably plays a crucial role in the binding of the barbed end of actin filaments to the plasma membrane. . FUNCTION: Probably plays a crucial role in the binding of the barbed end of actin filaments to the plasma membrane. . FUNCTION: Probably plays a crucial role in the binding of the barbed end of actin filaments to the plasma membrane. . FUNCTION: Probably plays a crucial role in the binding of the barbed end of actin filaments to the plasma membrane. . FUNCTION: Probably plays a crucial role in the binding of the barbed end of actin filaments to the plasma membrane. . FUNCTION: Probably plays a crucial role in the binding of the barbed end of actin filaments to the plasma membrane. . FUNCTION: Probably plays a crucial role in the binding of the barbed end of actin filaments to the plasma membrane. . |
Accessions | P35241 ENST00000645312.1 ENST00000533678.1 E9PN07 ENST00000528498.5 [P35241-5] ENST00000528900.5 [P35241-2] E9PNP4 Q6PKD3 ENST00000530301.5 [P35241-3] ENST00000645495.2 [P35241-1] ENST00000647231.1 [P35241-5] ENST00000533991.1 ENST00000544551.5 [P35241-4] E9PKN5 A0A2R8Y5S7 ENST00000530131.5 A0A2R8Y5P0 B0YJ88 A0A2R8Y4H6 ENST00000532118.5 ENST00000645527.1 E9PNV3 Q05CU6 ENST00000646663.1 E9PRS5 ENST00000642511.1 ENST00000528556.5 E9PQ82 ENST00000534683.1 A0A2R8Y7M3 ENST00000530749.5 [P35241-5] |