Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 18 studies | 43% ± 16% | |
peripheral blood | 16 studies | 29% ± 11% | |
intestine | 14 studies | 38% ± 20% | |
brain | 10 studies | 35% ± 12% | |
kidney | 9 studies | 50% ± 14% | |
eye | 9 studies | 32% ± 14% | |
liver | 9 studies | 40% ± 24% | |
uterus | 6 studies | 49% ± 19% | |
lymph node | 6 studies | 48% ± 18% | |
pancreas | 5 studies | 50% ± 22% | |
bone marrow | 5 studies | 33% ± 13% | |
placenta | 4 studies | 48% ± 19% | |
prostate | 4 studies | 61% ± 23% | |
breast | 4 studies | 53% ± 6% | |
ovary | 3 studies | 50% ± 17% | |
heart | 3 studies | 24% ± 8% | |
adipose | 3 studies | 30% ± 9% | |
adrenal gland | 3 studies | 53% ± 5% | |
esophagus | 3 studies | 51% ± 19% | |
skin | 3 studies | 31% ± 4% | |
thymus | 3 studies | 66% ± 21% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
stomach | 100% | 12421.80 | 359 / 359 | 100% | 231.87 | 286 / 286 |
uterus | 100% | 10249.03 | 170 / 170 | 100% | 172.99 | 458 / 459 |
ovary | 100% | 16642.15 | 180 / 180 | 100% | 130.63 | 429 / 430 |
liver | 100% | 24494.82 | 226 / 226 | 100% | 194.39 | 405 / 406 |
brain | 100% | 11185.69 | 2633 / 2642 | 100% | 122.09 | 705 / 705 |
intestine | 100% | 12391.28 | 966 / 966 | 100% | 272.48 | 525 / 527 |
bladder | 100% | 12901.95 | 21 / 21 | 100% | 175.89 | 502 / 504 |
lung | 99% | 15087.71 | 575 / 578 | 100% | 173.38 | 1155 / 1155 |
breast | 100% | 11384.20 | 459 / 459 | 99% | 187.66 | 1112 / 1118 |
esophagus | 100% | 10575.82 | 1444 / 1445 | 99% | 182.35 | 182 / 183 |
kidney | 100% | 22383.48 | 89 / 89 | 99% | 148.93 | 894 / 901 |
prostate | 100% | 9433.71 | 245 / 245 | 99% | 166.42 | 497 / 502 |
pancreas | 100% | 12515.22 | 328 / 328 | 99% | 118.12 | 176 / 178 |
thymus | 100% | 10032.43 | 652 / 653 | 98% | 88.56 | 595 / 605 |
skin | 100% | 12508.14 | 1803 / 1809 | 99% | 193.92 | 465 / 472 |
adrenal gland | 100% | 73394.38 | 258 / 258 | 97% | 248.19 | 223 / 230 |
lymph node | 0% | 0 | 0 / 0 | 100% | 188.88 | 29 / 29 |
spleen | 100% | 9960.56 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 149.41 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 55.90 | 1 / 1 |
adipose | 100% | 14124.70 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 9622.84 | 802 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 8782.44 | 1330 / 1335 | 0% | 0 | 0 / 0 |
heart | 95% | 9423.75 | 818 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 95% | 128.66 | 76 / 80 |
peripheral blood | 66% | 14061.28 | 614 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0002755 | Biological process | MyD88-dependent toll-like receptor signaling pathway |
GO_0006986 | Biological process | response to unfolded protein |
GO_0006919 | Biological process | activation of cysteine-type endopeptidase activity involved in apoptotic process |
GO_0050870 | Biological process | positive regulation of T cell activation |
GO_0032755 | Biological process | positive regulation of interleukin-6 production |
GO_0098761 | Biological process | cellular response to interleukin-7 |
GO_0032735 | Biological process | positive regulation of interleukin-12 production |
GO_0051702 | Biological process | biological process involved in interaction with symbiont |
GO_0032733 | Biological process | positive regulation of interleukin-10 production |
GO_0032727 | Biological process | positive regulation of interferon-alpha production |
GO_0002842 | Biological process | positive regulation of T cell mediated immune response to tumor cell |
GO_0051131 | Biological process | chaperone-mediated protein complex assembly |
GO_0043032 | Biological process | positive regulation of macrophage activation |
GO_0045041 | Biological process | protein import into mitochondrial intermembrane space |
GO_0006457 | Biological process | protein folding |
GO_0008637 | Biological process | apoptotic mitochondrial changes |
GO_0043066 | Biological process | negative regulation of apoptotic process |
GO_0006458 | Biological process | 'de novo' protein folding |
GO_0009409 | Biological process | response to cold |
GO_0050821 | Biological process | protein stabilization |
GO_0042113 | Biological process | B cell activation |
GO_0044406 | Biological process | adhesion of symbiont to host |
GO_0042026 | Biological process | protein refolding |
GO_0051604 | Biological process | protein maturation |
GO_0042100 | Biological process | B cell proliferation |
GO_0032729 | Biological process | positive regulation of type II interferon production |
GO_0043065 | Biological process | positive regulation of apoptotic process |
GO_0042110 | Biological process | T cell activation |
GO_0034514 | Biological process | mitochondrial unfolded protein response |
GO_0048291 | Biological process | isotype switching to IgG isotypes |
GO_0005615 | Cellular component | extracellular space |
GO_0097524 | Cellular component | sperm plasma membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0005769 | Cellular component | early endosome |
GO_0070062 | Cellular component | extracellular exosome |
GO_0032991 | Cellular component | protein-containing complex |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0030135 | Cellular component | coated vesicle |
GO_0009986 | Cellular component | cell surface |
GO_0005829 | Cellular component | cytosol |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0005737 | Cellular component | cytoplasm |
GO_0046696 | Cellular component | lipopolysaccharide receptor complex |
GO_0005905 | Cellular component | clathrin-coated pit |
GO_0097225 | Cellular component | sperm midpiece |
GO_0030141 | Cellular component | secretory granule |
GO_0140494 | Cellular component | migrasome |
GO_0019899 | Molecular function | enzyme binding |
GO_0003688 | Molecular function | DNA replication origin binding |
GO_0003697 | Molecular function | single-stranded DNA binding |
GO_0031625 | Molecular function | ubiquitin protein ligase binding |
GO_0034185 | Molecular function | apolipoprotein binding |
GO_0051082 | Molecular function | unfolded protein binding |
GO_0051087 | Molecular function | protein-folding chaperone binding |
GO_0140662 | Molecular function | ATP-dependent protein folding chaperone |
GO_0002039 | Molecular function | p53 binding |
GO_0005524 | Molecular function | ATP binding |
GO_0003723 | Molecular function | RNA binding |
GO_0016853 | Molecular function | isomerase activity |
GO_0034186 | Molecular function | apolipoprotein A-I binding |
GO_0001530 | Molecular function | lipopolysaccharide binding |
GO_0008035 | Molecular function | high-density lipoprotein particle binding |
GO_0005515 | Molecular function | protein binding |
GO_0016887 | Molecular function | ATP hydrolysis activity |
GO_0003725 | Molecular function | double-stranded RNA binding |
Gene name | HSPD1 |
Protein name | 60 kDa heat shock protein, mitochondrial (EC 5.6.1.7) (60 kDa chaperonin) (Chaperonin 60) (Heat shock protein 60) Heat shock 60kDa protein 1 isoform 4 60 kDa heat shock protein, mitochondrial (EC 5.6.1.7) (60 kDa chaperonin) (Chaperonin 60) (CPN60) (Heat shock protein 60) (HSP-60) (Hsp60) (HuCHA60) (Mitochondrial matrix protein P1) (P60 lymphocyte protein) Heat shock 60kDa protein 1 isoform 2 Heat shock protein family D (Hsp60) member 1 60 kDa heat shock protein, mitochondrial |
Synonyms | hCG_2012240 HSP60 |
Description | FUNCTION: Chaperonin implicated in mitochondrial protein import and macromolecular assembly. Together with Hsp10, facilitates the correct folding of imported proteins. May also prevent misfolding and promote the refolding and proper assembly of unfolded polypeptides generated under stress conditions in the mitochondrial matrix . The functional units of these chaperonins consist of heptameric rings of the large subunit Hsp60, which function as a back-to-back double ring. In a cyclic reaction, Hsp60 ring complexes bind one unfolded substrate protein per ring, followed by the binding of ATP and association with 2 heptameric rings of the co-chaperonin Hsp10. This leads to sequestration of the substrate protein in the inner cavity of Hsp60 where, for a certain period of time, it can fold undisturbed by other cell components. Synchronous hydrolysis of ATP in all Hsp60 subunits results in the dissociation of the chaperonin rings and the release of ADP and the folded substrate protein (Probable). . FUNCTION: Chaperonin implicated in mitochondrial protein import and macromolecular assembly. Together with Hsp10, facilitates the correct folding of imported proteins. May also prevent misfolding and promote the refolding and proper assembly of unfolded polypeptides generated under stress conditions in the mitochondrial matrix. The functional units of these chaperonins consist of heptameric rings of the large subunit Hsp60, which function as a back-to-back double ring. In a cyclic reaction, Hsp60 ring complexes bind one unfolded substrate protein per ring, followed by the binding of ATP and association with 2 heptameric rings of the co-chaperonin Hsp10. This leads to sequestration of the substrate protein in the inner cavity of Hsp60 where, for a certain period of time, it can fold undisturbed by other cell components. Synchronous hydrolysis of ATP in all Hsp60 subunits results in the dissociation of the chaperonin rings and the release of ADP and the folded substrate protein. . FUNCTION: Chaperonin implicated in mitochondrial protein import and macromolecular assembly. Together with Hsp10, facilitates the correct folding of imported proteins. May also prevent misfolding and promote the refolding and proper assembly of unfolded polypeptides generated under stress conditions in the mitochondrial matrix. The functional units of these chaperonins consist of heptameric rings of the large subunit Hsp60, which function as a back-to-back double ring. In a cyclic reaction, Hsp60 ring complexes bind one unfolded substrate protein per ring, followed by the binding of ATP and association with 2 heptameric rings of the co-chaperonin Hsp10. This leads to sequestration of the substrate protein in the inner cavity of Hsp60 where, for a certain period of time, it can fold undisturbed by other cell components. Synchronous hydrolysis of ATP in all Hsp60 subunits results in the dissociation of the chaperonin rings and the release of ADP and the folded substrate protein. . FUNCTION: Chaperonin implicated in mitochondrial protein import and macromolecular assembly. Together with Hsp10, facilitates the correct folding of imported proteins. May also prevent misfolding and promote the refolding and proper assembly of unfolded polypeptides generated under stress conditions in the mitochondrial matrix. The functional units of these chaperonins consist of heptameric rings of the large subunit Hsp60, which function as a back-to-back double ring. In a cyclic reaction, Hsp60 ring complexes bind one unfolded substrate protein per ring, followed by the binding of ATP and association with 2 heptameric rings of the co-chaperonin Hsp10. This leads to sequestration of the substrate protein in the inner cavity of Hsp60 where, for a certain period of time, it can fold undisturbed by other cell components. Synchronous hydrolysis of ATP in all Hsp60 subunits results in the dissociation of the chaperonin rings and the release of ADP and the folded substrate protein. . FUNCTION: Chaperonin implicated in mitochondrial protein import and macromolecular assembly. Together with Hsp10, facilitates the correct folding of imported proteins. May also prevent misfolding and promote the refolding and proper assembly of unfolded polypeptides generated under stress conditions in the mitochondrial matrix. The functional units of these chaperonins consist of heptameric rings of the large subunit Hsp60, which function as a back-to-back double ring. In a cyclic reaction, Hsp60 ring complexes bind one unfolded substrate protein per ring, followed by the binding of ATP and association with 2 heptameric rings of the co-chaperonin Hsp10. This leads to sequestration of the substrate protein in the inner cavity of Hsp60 where, for a certain period of time, it can fold undisturbed by other cell components. Synchronous hydrolysis of ATP in all Hsp60 subunits results in the dissociation of the chaperonin rings and the release of ADP and the folded substrate protein. . FUNCTION: Chaperonin implicated in mitochondrial protein import and macromolecular assembly. Together with Hsp10, facilitates the correct folding of imported proteins. May also prevent misfolding and promote the refolding and proper assembly of unfolded polypeptides generated under stress conditions in the mitochondrial matrix. The functional units of these chaperonins consist of heptameric rings of the large subunit Hsp60, which function as a back-to-back double ring. In a cyclic reaction, Hsp60 ring complexes bind one unfolded substrate protein per ring, followed by the binding of ATP and association with 2 heptameric rings of the co-chaperonin Hsp10. This leads to sequestration of the substrate protein in the inner cavity of Hsp60 where, for a certain period of time, it can fold undisturbed by other cell components. Synchronous hydrolysis of ATP in all Hsp60 subunits results in the dissociation of the chaperonin rings and the release of ADP and the folded substrate protein. . FUNCTION: Chaperonin implicated in mitochondrial protein import and macromolecular assembly. Together with Hsp10, facilitates the correct folding of imported proteins. May also prevent misfolding and promote the refolding and proper assembly of unfolded polypeptides generated under stress conditions in the mitochondrial matrix. The functional units of these chaperonins consist of heptameric rings of the large subunit Hsp60, which function as a back-to-back double ring. In a cyclic reaction, Hsp60 ring complexes bind one unfolded substrate protein per ring, followed by the binding of ATP and association with 2 heptameric rings of the co-chaperonin Hsp10. This leads to sequestration of the substrate protein in the inner cavity of Hsp60 where, for a certain period of time, it can fold undisturbed by other cell components. Synchronous hydrolysis of ATP in all Hsp60 subunits results in the dissociation of the chaperonin rings and the release of ADP and the folded substrate protein. . FUNCTION: Chaperonin implicated in mitochondrial protein import and macromolecular assembly. Together with Hsp10, facilitates the correct folding of imported proteins. May also prevent misfolding and promote the refolding and proper assembly of unfolded polypeptides generated under stress conditions in the mitochondrial matrix. The functional units of these chaperonins consist of heptameric rings of the large subunit Hsp60, which function as a back-to-back double ring. In a cyclic reaction, Hsp60 ring complexes bind one unfolded substrate protein per ring, followed by the binding of ATP and association with 2 heptameric rings of the co-chaperonin Hsp10. This leads to sequestration of the substrate protein in the inner cavity of Hsp60 where, for a certain period of time, it can fold undisturbed by other cell components. Synchronous hydrolysis of ATP in all Hsp60 subunits results in the dissociation of the chaperonin rings and the release of ADP and the folded substrate protein. . |
Accessions | ENST00000677403.1 B9VPB4 A0A7I2V599 B9VP19 A0A0S2Z477 ENST00000428204.6 [P10809-1] ENST00000440114.2 E7ESH4 ENST00000418022 ENST00000418022.2 [P10809-1] A0A7I2V369 ENST00000430176.6 Q53QD5 ENST00000679291.1 ENST00000676933.1 A0A7I2YQ71 ENST00000428204 ENST00000677454.1 E7EXB4 Q53SE2 B9VP24 A0A7I2V2X6 A0A7I2V5M1 F8WBB1 C9JCQ4 ENST00000677913.1 [P10809-1] ENST00000452200 A0A0S2Z415 C9J0S9 ENST00000345042.6 [P10809-1] C9JL25 ENST00000439605 ENST00000426480 ENST00000678545.1 ENST00000439605.2 [P10809-1] ENST00000677792.1 P10809 A0A7I2YQK6 C9JL19 ENST00000388968.8 [P10809-1] A0A7I2V5K3 A0A024R3X4 ENST00000678170.1 ENST00000678621.1 ENST00000426480.2 [P10809-1] ENST00000678761.1 [P10809-1] ENST00000452200.6 [P10809-1] B3GQS7 |