Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 6 studies | 23% ± 5% | |
epithelial cell | 4 studies | 23% ± 4% | |
astrocyte | 4 studies | 27% ± 7% | |
endothelial cell | 3 studies | 22% ± 4% | |
GABAergic neuron | 3 studies | 42% ± 2% | |
glutamatergic neuron | 3 studies | 49% ± 5% | |
oligodendrocyte precursor cell | 3 studies | 23% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 37% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 876.09 | 2638 / 2642 | 100% | 7.44 | 705 / 705 |
ovary | 100% | 969.48 | 180 / 180 | 100% | 6.02 | 428 / 430 |
breast | 100% | 991.80 | 459 / 459 | 99% | 8.40 | 1112 / 1118 |
esophagus | 100% | 786.58 | 1445 / 1445 | 99% | 9.32 | 182 / 183 |
prostate | 100% | 957.51 | 245 / 245 | 99% | 7.41 | 499 / 502 |
pancreas | 100% | 593.07 | 328 / 328 | 99% | 5.38 | 176 / 178 |
lung | 99% | 698.53 | 573 / 578 | 100% | 6.97 | 1151 / 1155 |
thymus | 100% | 956.37 | 653 / 653 | 99% | 6.35 | 597 / 605 |
stomach | 100% | 689.51 | 358 / 359 | 99% | 8.13 | 283 / 286 |
bladder | 100% | 913.24 | 21 / 21 | 98% | 6.33 | 495 / 504 |
uterus | 100% | 983.04 | 170 / 170 | 98% | 5.57 | 450 / 459 |
intestine | 100% | 900.49 | 966 / 966 | 98% | 8.47 | 516 / 527 |
kidney | 100% | 812.96 | 89 / 89 | 96% | 5.74 | 866 / 901 |
adrenal gland | 100% | 931.88 | 258 / 258 | 96% | 5.35 | 221 / 230 |
liver | 100% | 857.66 | 226 / 226 | 93% | 4.31 | 379 / 406 |
skin | 100% | 1008.34 | 1809 / 1809 | 90% | 5.73 | 427 / 472 |
adipose | 100% | 839.68 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 704.13 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 5.78 | 29 / 29 |
spleen | 100% | 993.28 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 5.96 | 45 / 45 |
muscle | 100% | 694.14 | 801 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 594.43 | 847 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 69% | 478.73 | 643 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 59% | 2.67 | 47 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0042254 | Biological process | ribosome biogenesis |
GO_0005730 | Cellular component | nucleolus |
GO_0005694 | Cellular component | chromosome |
GO_0005739 | Cellular component | mitochondrion |
GO_0005525 | Molecular function | GTP binding |
GO_0003924 | Molecular function | GTPase activity |
GO_0005515 | Molecular function | protein binding |
GO_0000287 | Molecular function | magnesium ion binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | GTPBP10 |
Protein name | GTP binding protein 10 GTP-binding protein 10 (Protein obg homolog 2) (ObgH2) GTP-binding protein 10 |
Synonyms | OBGH2 UG0751c10 |
Description | FUNCTION: May be involved in the ribosome maturation process. Complements an ObgE(CgtA) function in E.coli ribosome maturation. Plays a role of GTPase in vitro. When missing, disorganization of the nucleolar architecture is observed. . |
Accessions | C9J8R7 F8WBB5 C9JEQ8 ENST00000450619.5 ENST00000421719.5 ENST00000222511.11 [A4D1E9-1] F8WBY0 ENST00000417207.5 ENST00000439832.5 ENST00000380058.7 [A4D1E9-3] A4D1E9 C9JNI1 F8WCN4 ENST00000453512.5 ENST00000426366.5 ENST00000257659.12 [A4D1E9-2] |