Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2846.04 | 1445 / 1445 | 100% | 27.83 | 183 / 183 |
lung | 100% | 3338.61 | 578 / 578 | 100% | 31.57 | 1155 / 1155 |
ovary | 100% | 2601.31 | 180 / 180 | 100% | 19.45 | 430 / 430 |
uterus | 100% | 2742.51 | 170 / 170 | 100% | 35.76 | 459 / 459 |
breast | 100% | 3210.54 | 459 / 459 | 100% | 35.05 | 1117 / 1118 |
thymus | 100% | 2755.60 | 653 / 653 | 100% | 26.81 | 604 / 605 |
prostate | 100% | 2404.86 | 245 / 245 | 100% | 24.09 | 501 / 502 |
brain | 100% | 2046.95 | 2633 / 2642 | 100% | 23.49 | 705 / 705 |
bladder | 100% | 2706.90 | 21 / 21 | 100% | 30.49 | 502 / 504 |
liver | 99% | 1315.89 | 224 / 226 | 100% | 17.34 | 405 / 406 |
stomach | 100% | 2272.70 | 359 / 359 | 99% | 22.32 | 282 / 286 |
intestine | 100% | 2791.84 | 966 / 966 | 98% | 24.21 | 519 / 527 |
pancreas | 98% | 1277.77 | 322 / 328 | 99% | 25.67 | 177 / 178 |
kidney | 100% | 1972.71 | 89 / 89 | 98% | 20.19 | 879 / 901 |
adrenal gland | 100% | 2560.12 | 258 / 258 | 97% | 16.38 | 224 / 230 |
skin | 100% | 3755.48 | 1809 / 1809 | 94% | 26.99 | 445 / 472 |
blood vessel | 100% | 2957.98 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 29.69 | 29 / 29 |
muscle | 100% | 4215.32 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2857.49 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 33.31 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 12.96 | 1 / 1 |
adipose | 100% | 3578.11 | 1203 / 1204 | 0% | 0 | 0 / 0 |
heart | 98% | 2009.81 | 840 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 93% | 2186.53 | 866 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 68% | 9.94 | 54 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006396 | Biological process | RNA processing |
GO_0042274 | Biological process | ribosomal small subunit biogenesis |
GO_0005730 | Cellular component | nucleolus |
GO_0005694 | Cellular component | chromosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0032040 | Cellular component | small-subunit processome |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | DNTTIP2 |
Protein name | Deoxynucleotidyltransferase terminal interacting protein 2 Deoxynucleotidyltransferase terminal-interacting protein 2 (Estrogen receptor-binding protein) (LPTS-interacting protein 2) (LPTS-RP2) (Terminal deoxynucleotidyltransferase-interacting factor 2) (TdIF2) (TdT-interacting factor 2) |
Synonyms | ERBP TDIF2 |
Description | FUNCTION: Regulates the transcriptional activity of DNTT and ESR1. May function as a chromatin remodeling protein . Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit. During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome . . |
Accessions | Q5QJE6 E9PRB3 ENST00000436063.7 ENST00000359208.6 ENST00000528680.1 J3KP30 |