Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 19 studies | 79% ± 21% | |
peripheral blood | 19 studies | 91% ± 12% | |
intestine | 14 studies | 81% ± 24% | |
brain | 14 studies | 40% ± 21% | |
eye | 10 studies | 57% ± 19% | |
kidney | 8 studies | 78% ± 20% | |
liver | 7 studies | 63% ± 26% | |
bone marrow | 6 studies | 87% ± 11% | |
pancreas | 5 studies | 75% ± 21% | |
uterus | 5 studies | 91% ± 13% | |
lymph node | 4 studies | 98% ± 2% | |
placenta | 4 studies | 87% ± 20% | |
heart | 4 studies | 42% ± 21% | |
adipose | 4 studies | 45% ± 30% | |
esophagus | 4 studies | 79% ± 15% | |
prostate | 4 studies | 88% ± 21% | |
breast | 4 studies | 95% ± 4% | |
skin | 3 studies | 82% ± 19% | |
stomach | 3 studies | 67% ± 19% | |
thymus | 3 studies | 84% ± 21% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 30829.02 | 258 / 258 | 100% | 574.08 | 230 / 230 |
esophagus | 100% | 35481.10 | 1445 / 1445 | 100% | 445.57 | 183 / 183 |
ovary | 100% | 81336.53 | 180 / 180 | 100% | 797.72 | 430 / 430 |
pancreas | 100% | 39491.83 | 328 / 328 | 100% | 605.48 | 178 / 178 |
thymus | 100% | 30420.66 | 653 / 653 | 100% | 793.33 | 605 / 605 |
uterus | 100% | 43458.55 | 170 / 170 | 100% | 803.98 | 459 / 459 |
skin | 100% | 51482.23 | 1809 / 1809 | 100% | 681.82 | 471 / 472 |
stomach | 100% | 28033.87 | 359 / 359 | 100% | 761.47 | 285 / 286 |
prostate | 100% | 41371.37 | 245 / 245 | 100% | 1084.17 | 500 / 502 |
brain | 100% | 15572.09 | 2631 / 2642 | 100% | 433.04 | 704 / 705 |
intestine | 100% | 31403.40 | 966 / 966 | 99% | 970.47 | 524 / 527 |
liver | 100% | 15607.65 | 226 / 226 | 99% | 422.11 | 403 / 406 |
breast | 100% | 37670.49 | 459 / 459 | 99% | 599.13 | 1108 / 1118 |
bladder | 100% | 32531.67 | 21 / 21 | 99% | 849.15 | 499 / 504 |
kidney | 100% | 21508.24 | 89 / 89 | 99% | 467.39 | 891 / 901 |
lung | 99% | 24523.78 | 575 / 578 | 99% | 550.77 | 1142 / 1155 |
eye | 0% | 0 | 0 / 0 | 100% | 1496.02 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 1459.48 | 29 / 29 |
spleen | 100% | 36217.26 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 697.51 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 614.95 | 1 / 1 |
blood vessel | 100% | 26832.65 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 31355.84 | 1202 / 1204 | 0% | 0 | 0 / 0 |
muscle | 99% | 16399.84 | 791 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 29930.13 | 906 / 929 | 0% | 0 | 0 / 0 |
heart | 97% | 14570.48 | 835 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006412 | Biological process | translation |
GO_0002181 | Biological process | cytoplasmic translation |
GO_0005730 | Cellular component | nucleolus |
GO_0022626 | Cellular component | cytosolic ribosome |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005829 | Cellular component | cytosol |
GO_0005791 | Cellular component | rough endoplasmic reticulum |
GO_0016020 | Cellular component | membrane |
GO_0005925 | Cellular component | focal adhesion |
GO_0022625 | Cellular component | cytosolic large ribosomal subunit |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0003735 | Molecular function | structural constituent of ribosome |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | RPL18 |
Protein name | Ribosomal protein L18 Large ribosomal subunit protein eL18 (60S ribosomal protein L18) |
Synonyms | hCG_2000370 |
Description | FUNCTION: Component of the large ribosomal subunit . The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell . . |
Accessions | ENST00000549273.5 ENST00000084795.9 ENST00000547897.5 ENST00000550973.5 F8VUA6 Q07020 ENST00000546623.5 A0A075B7A0 ENST00000549920.6 [Q07020-1] G3V203 Q0QEW2 H0YHA7 J3QQ67 ENST00000552588.5 [Q07020-2] F8VXR6 ENST00000550645.5 ENST00000549370.5 F8VYV2 |