Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 13 studies | 36% ± 19% | |
lung | 10 studies | 22% ± 6% | |
peripheral blood | 8 studies | 23% ± 7% | |
eye | 7 studies | 25% ± 11% | |
liver | 5 studies | 33% ± 15% | |
kidney | 4 studies | 20% ± 2% | |
intestine | 4 studies | 21% ± 8% | |
adipose | 4 studies | 23% ± 4% | |
heart | 3 studies | 23% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 4805.42 | 459 / 459 | 100% | 17.34 | 1118 / 1118 |
esophagus | 100% | 4480.44 | 1445 / 1445 | 100% | 16.65 | 183 / 183 |
intestine | 100% | 4879.92 | 966 / 966 | 100% | 14.93 | 527 / 527 |
lung | 100% | 4401.50 | 578 / 578 | 100% | 17.37 | 1155 / 1155 |
ovary | 100% | 5496.14 | 180 / 180 | 100% | 12.05 | 430 / 430 |
prostate | 100% | 5254.64 | 245 / 245 | 100% | 15.04 | 502 / 502 |
skin | 100% | 4944.44 | 1809 / 1809 | 100% | 16.68 | 472 / 472 |
stomach | 100% | 3327.08 | 359 / 359 | 100% | 14.31 | 286 / 286 |
uterus | 100% | 5546.53 | 170 / 170 | 100% | 17.73 | 459 / 459 |
thymus | 100% | 5588.42 | 653 / 653 | 100% | 18.09 | 604 / 605 |
bladder | 100% | 4640.57 | 21 / 21 | 100% | 15.28 | 503 / 504 |
brain | 100% | 3507.08 | 2636 / 2642 | 100% | 15.31 | 705 / 705 |
liver | 100% | 2900.94 | 226 / 226 | 100% | 10.52 | 405 / 406 |
pancreas | 100% | 2456.05 | 327 / 328 | 100% | 15.27 | 178 / 178 |
kidney | 100% | 3849.31 | 89 / 89 | 99% | 13.17 | 892 / 901 |
adrenal gland | 100% | 3587.39 | 258 / 258 | 97% | 11.00 | 222 / 230 |
adipose | 100% | 4386.89 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 4054.32 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 20.86 | 29 / 29 |
spleen | 100% | 6426.03 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 17.19 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.96 | 1 / 1 |
muscle | 100% | 2886.92 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 100% | 2763.24 | 857 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 10.91 | 78 / 80 |
peripheral blood | 96% | 2983.42 | 891 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0031124 | Biological process | mRNA 3'-end processing |
GO_0007283 | Biological process | spermatogenesis |
GO_0006301 | Biological process | postreplication repair |
GO_0005847 | Cellular component | mRNA cleavage and polyadenylation specificity factor complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005581 | Cellular component | collagen trimer |
GO_0001650 | Cellular component | fibrillar center |
GO_0005634 | Cellular component | nucleus |
GO_0003723 | Molecular function | RNA binding |
Gene name | WDR33 |
Protein name | WD repeat domain 33 pre-mRNA 3' end processing protein WDR33 (WD repeat-containing protein 33) (WD repeat-containing protein of 146 kDa) |
Synonyms | WDC146 |
Description | FUNCTION: Essential for both cleavage and polyadenylation of pre-mRNA 3' ends. . |
Accessions | ENST00000436787.5 Q9C0J8 C9J8B4 B9A053 ENST00000409658.7 [Q9C0J8-2] ENST00000408998.1 ENST00000322313.9 [Q9C0J8-1] ENST00000393006.5 [Q9C0J8-3] |