KTN1 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
endothelial cell	51 studies	54% ± 18%	Explore
fibroblast	42 studies	38% ± 13%	Explore
macrophage	41 studies	36% ± 13%	Explore
B cell	39 studies	35% ± 9%	Explore
pericyte	38 studies	49% ± 14%	Explore
T cell	36 studies	30% ± 8%	Explore
natural killer cell	36 studies	30% ± 8%	Explore
CD8-positive, alpha-beta T cell	33 studies	30% ± 7%	Explore
smooth muscle cell	32 studies	44% ± 12%	Explore
CD4-positive, alpha-beta T cell	32 studies	30% ± 7%	Explore
conventional dendritic cell	28 studies	39% ± 14%	Explore
endothelial cell of lymphatic vessel	25 studies	55% ± 15%	Explore
epithelial cell	24 studies	48% ± 19%	Explore
basal cell	23 studies	50% ± 17%	Explore
regulatory T cell	23 studies	30% ± 7%	Explore
mast cell	22 studies	37% ± 13%	Explore
classical monocyte	22 studies	34% ± 11%	Explore
monocyte	21 studies	31% ± 9%	Explore
plasmacytoid dendritic cell	21 studies	46% ± 14%	Explore
astrocyte	20 studies	39% ± 18%	Explore
dendritic cell	19 studies	39% ± 20%	Explore
memory B cell	19 studies	35% ± 9%	Explore
ciliated cell	19 studies	69% ± 17%	Explore
naive B cell	19 studies	34% ± 9%	Explore
non-classical monocyte	19 studies	31% ± 11%	Explore
microglial cell	19 studies	39% ± 15%	Explore
mature NK T cell	18 studies	30% ± 7%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	17 studies	31% ± 9%	Explore
connective tissue cell	17 studies	36% ± 10%	Explore
gamma-delta T cell	17 studies	36% ± 13%	Explore
oligodendrocyte	16 studies	40% ± 17%	Explore
capillary endothelial cell	16 studies	46% ± 16%	Explore
plasma cell	15 studies	30% ± 9%	Explore
CD16-positive, CD56-dim natural killer cell, human	15 studies	29% ± 8%	Explore
CD16-negative, CD56-bright natural killer cell, human	15 studies	31% ± 8%	Explore
myofibroblast cell	15 studies	38% ± 10%	Explore
myeloid cell	15 studies	36% ± 12%	Explore
oligodendrocyte precursor cell	14 studies	35% ± 17%	Explore
endothelial cell of artery	14 studies	52% ± 19%	Explore
vein endothelial cell	14 studies	57% ± 17%	Explore
mucosal invariant T cell	14 studies	30% ± 6%	Explore
endothelial cell of vascular tree	14 studies	56% ± 15%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	13 studies	31% ± 10%	Explore
type I pneumocyte	12 studies	46% ± 14%	Explore
CD8-positive, alpha-beta memory T cell	12 studies	38% ± 9%	Explore
type II pneumocyte	11 studies	41% ± 14%	Explore
CD4-positive, alpha-beta memory T cell	11 studies	33% ± 9%	Explore
club cell	11 studies	42% ± 15%	Explore
secretory cell	11 studies	53% ± 13%	Explore
effector memory CD8-positive, alpha-beta T cell	11 studies	37% ± 8%	Explore
mesothelial cell	11 studies	49% ± 15%	Explore
leukocyte	10 studies	35% ± 10%	Explore
glutamatergic neuron	10 studies	49% ± 22%	Explore
progenitor cell	10 studies	32% ± 12%	Explore
plasmablast	9 studies	39% ± 19%	Explore
GABAergic neuron	9 studies	46% ± 22%	Explore
neuron	9 studies	48% ± 15%	Explore
retinal cone cell	9 studies	63% ± 19%	Explore
retinal rod cell	9 studies	47% ± 14%	Explore
adipocyte	9 studies	35% ± 9%	Explore
alveolar macrophage	8 studies	40% ± 12%	Explore
respiratory goblet cell	8 studies	48% ± 9%	Explore
renal alpha-intercalated cell	8 studies	51% ± 17%	Explore
abnormal cell	8 studies	46% ± 13%	Explore
goblet cell	8 studies	40% ± 17%	Explore
amacrine cell	8 studies	46% ± 18%	Explore
effector CD8-positive, alpha-beta T cell	7 studies	29% ± 7%	Explore
mononuclear phagocyte	7 studies	37% ± 13%	Explore
kidney loop of Henle epithelial cell	7 studies	35% ± 17%	Explore
retinal ganglion cell	7 studies	73% ± 22%	Explore
precursor B cell	7 studies	41% ± 13%	Explore
innate lymphoid cell	7 studies	34% ± 9%	Explore
mucus secreting cell	7 studies	30% ± 6%	Explore
T follicular helper cell	7 studies	31% ± 7%	Explore
ionocyte	6 studies	67% ± 13%	Explore
kidney distal convoluted tubule epithelial cell	6 studies	41% ± 9%	Explore
epithelial cell of proximal tubule	6 studies	25% ± 8%	Explore
interneuron	6 studies	49% ± 25%	Explore
hematopoietic stem cell	6 studies	42% ± 14%	Explore
lymphocyte	6 studies	46% ± 15%	Explore
retina horizontal cell	6 studies	68% ± 15%	Explore
cardiac muscle cell	6 studies	63% ± 16%	Explore
Mueller cell	6 studies	63% ± 17%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	37% ± 10%	Explore
hematopoietic precursor cell	5 studies	49% ± 13%	Explore
exhausted T cell	5 studies	33% ± 9%	Explore
effector CD4-positive, alpha-beta T cell	5 studies	29% ± 7%	Explore
enterocyte	5 studies	28% ± 7%	Explore
enteroendocrine cell	5 studies	44% ± 15%	Explore
IgA plasma cell	5 studies	21% ± 5%	Explore
IgG plasma cell	5 studies	20% ± 3%	Explore
transit amplifying cell	5 studies	51% ± 26%	Explore
retinal bipolar neuron	5 studies	51% ± 13%	Explore
glial cell	5 studies	36% ± 16%	Explore
OFF-bipolar cell	5 studies	47% ± 23%	Explore
ON-bipolar cell	5 studies	49% ± 21%	Explore
renal principal cell	5 studies	49% ± 20%	Explore
pro-B cell	5 studies	50% ± 14%	Explore
immature B cell	5 studies	36% ± 7%	Explore
retinal pigment epithelial cell	5 studies	59% ± 25%	Explore
adventitial cell	5 studies	27% ± 8%	Explore
hepatocyte	5 studies	51% ± 23%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	26% ± 5%	Explore
deuterosomal cell	4 studies	51% ± 6%	Explore
duct epithelial cell	4 studies	48% ± 6%	Explore
precursor cell	4 studies	45% ± 13%	Explore
squamous epithelial cell	4 studies	46% ± 22%	Explore
pancreatic A cell	4 studies	58% ± 16%	Explore
type B pancreatic cell	4 studies	59% ± 22%	Explore
glomerular endothelial cell	4 studies	53% ± 8%	Explore
podocyte	4 studies	48% ± 17%	Explore
parietal epithelial cell	4 studies	47% ± 21%	Explore
intestinal crypt stem cell	4 studies	33% ± 8%	Explore
granule cell	4 studies	27% ± 9%	Explore
erythroblast	4 studies	50% ± 22%	Explore
brush cell	4 studies	44% ± 25%	Explore
CD4-positive helper T cell	4 studies	37% ± 14%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	82% ± 4%	Explore
myoepithelial cell	4 studies	52% ± 2%	Explore
granulocyte	4 studies	34% ± 8%	Explore
luminal cell of prostate epithelium	4 studies	39% ± 8%	Explore
muscle cell	4 studies	50% ± 19%	Explore
keratinocyte	4 studies	56% ± 16%	Explore
T-helper 17 cell	4 studies	32% ± 10%	Explore
double negative thymocyte	4 studies	40% ± 15%	Explore
hillock cell	3 studies	41% ± 8%	Explore
pancreatic D cell	3 studies	62% ± 24%	Explore
monocyte-derived dendritic cell	3 studies	38% ± 21%	Explore
neural crest cell	3 studies	50% ± 4%	Explore
GABAergic interneuron	3 studies	31% ± 5%	Explore
extravillous trophoblast	3 studies	55% ± 20%	Explore
placental villous trophoblast	3 studies	45% ± 9%	Explore
megakaryocyte	3 studies	32% ± 16%	Explore
neuroendocrine cell	3 studies	54% ± 23%	Explore
serous secreting cell	3 studies	37% ± 11%	Explore
tissue-resident macrophage	3 studies	34% ± 8%	Explore
glycinergic amacrine cell	3 studies	39% ± 15%	Explore
rod bipolar cell	3 studies	67% ± 5%	Explore
germinal center B cell	3 studies	42% ± 4%	Explore
intermediate monocyte	3 studies	41% ± 23%	Explore
endothelial cell of sinusoid	3 studies	44% ± 15%	Explore
acinar cell	3 studies	46% ± 25%	Explore
pancreatic ductal cell	3 studies	65% ± 16%	Explore
ependymal cell	3 studies	45% ± 13%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	71% ± 6%	Explore
chondrocyte	3 studies	33% ± 5%	Explore
erythrocyte	3 studies	42% ± 15%	Explore
group 3 innate lymphoid cell	3 studies	49% ± 13%	Explore
Schwann cell	3 studies	36% ± 14%	Explore
melanocyte	3 studies	46% ± 10%	Explore
T-helper 1 cell	3 studies	33% ± 8%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	30% ± 5%	Explore
central memory CD8-positive, alpha-beta T cell	3 studies	28% ± 6%	Explore
progenitor cell of mammary luminal epithelium	3 studies	37% ± 6%	Explore
mural cell	3 studies	52% ± 10%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	21 studies	42% ± 16%	Explore
brain	21 studies	39% ± 19%	Explore
peripheral blood	17 studies	33% ± 11%	Explore
eye	12 studies	50% ± 18%	Explore
kidney	11 studies	30% ± 10%	Explore
intestine	10 studies	32% ± 11%	Explore
heart	6 studies	41% ± 12%	Explore
liver	6 studies	43% ± 14%	Explore
uterus	5 studies	45% ± 21%	Explore
lymph node	5 studies	37% ± 10%	Explore
breast	5 studies	45% ± 13%	Explore
pancreas	4 studies	58% ± 20%	Explore
bone marrow	4 studies	36% ± 14%	Explore
esophagus	4 studies	33% ± 20%	Explore
prostate	4 studies	41% ± 8%	Explore
adipose	4 studies	37% ± 7%	Explore
placenta	3 studies	48% ± 14%	Explore
adrenal gland	3 studies	32% ± 11%	Explore
thymus	3 studies	39% ± 16%	Explore
skin	3 studies	41% ± 9%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	11036.32	1444 / 1445	100%	59.81	183 / 183
lung	100%	11047.58	577 / 578	100%	43.70	1155 / 1155
breast	100%	11854.78	459 / 459	100%	65.88	1114 / 1118
thymus	100%	12679.73	653 / 653	99%	49.11	601 / 605
brain	100%	9092.84	2641 / 2642	99%	40.38	700 / 705
uterus	100%	10121.44	170 / 170	99%	42.92	454 / 459
bladder	100%	13111.67	21 / 21	99%	46.42	498 / 504
prostate	100%	8754.73	244 / 245	99%	44.21	497 / 502
pancreas	99%	5885.42	324 / 328	99%	40.94	176 / 178
intestine	100%	12330.94	966 / 966	98%	34.56	514 / 527
stomach	100%	7570.79	359 / 359	97%	31.33	278 / 286
ovary	100%	9401.65	180 / 180	96%	19.14	412 / 430
kidney	100%	9414.38	89 / 89	96%	34.19	862 / 901
adrenal gland	100%	12394.01	258 / 258	96%	40.79	220 / 230
liver	97%	4847.79	219 / 226	94%	24.63	382 / 406
skin	100%	11384.12	1805 / 1809	87%	30.84	410 / 472
blood vessel	100%	14969.08	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	27.44	29 / 29
muscle	100%	28228.12	803 / 803	0%	0	0 / 0
spleen	100%	6431.54	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	43.55	45 / 45
ureter	0%	0	0 / 0	100%	21.59	1 / 1
adipose	100%	12196.85	1203 / 1204	0%	0	0 / 0
heart	97%	12087.18	838 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	41%	9.70	33 / 80
peripheral blood	31%	3499.89	288 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

IV. Literature review

[source]

Gene name	KTN1
Protein name	Kinectin (CG-1 antigen) (Kinesin receptor) KTN1 protein Kinectin 1 Kinectin 1 (cDNA FLJ55573, highly similar to Kinectin)
Synonyms	CG1 KIAA0004
Description	FUNCTION: Receptor for kinesin thus involved in kinesin-driven vesicle motility. Accumulates in integrin-based adhesion complexes (IAC) upon integrin aggregation by fibronectin.
Accessions	ENST00000554567.1 ENST00000438792.6 [Q86UP2-2] Q6NZ46 ENST00000395308.5 [Q86UP2-3] G3V475 ENST00000554294.1 H0YJZ8 ENST00000553360.5 G3V4Y7 ENST00000555498.5 ENST00000395314.8 [Q86UP2-1] ENST00000413890.6 [Q86UP2-3] Q86UP2 H0YJV5 ENST00000554890.1 G3V5P0 H0YJP2 ENST00000555573.5 Q3SWV9 ENST00000557267.1 ENST00000459737.5 [Q86UP2-1] ENST00000553624.5 ENST00000554507.5 ENST00000395309.7 [Q86UP2-3] ENST00000395311.5 [Q86UP2-3] ENST00000554570.1 G3V4L8 G3V5Q0 B7Z6P3 Q6PDF7 G3V5G2 ENST00000553710.1 H0YJB7

GO_0015031	Biological process	protein transport
GO_0007018	Biological process	microtubule-based movement
GO_0005788	Cellular component	endoplasmic reticulum lumen
GO_0005783	Cellular component	endoplasmic reticulum
GO_0005886	Cellular component	plasma membrane
GO_0016020	Cellular component	membrane
GO_0005789	Cellular component	endoplasmic reticulum membrane
GO_0045296	Molecular function	cadherin binding
GO_0005515	Molecular function	protein binding
GO_0019894	Molecular function	kinesin binding
GO_0003723	Molecular function	RNA binding

KTN1 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review