Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 18 studies | 44% ± 16% | |
peripheral blood | 18 studies | 45% ± 13% | |
intestine | 13 studies | 34% ± 14% | |
brain | 10 studies | 35% ± 15% | |
eye | 10 studies | 37% ± 17% | |
kidney | 9 studies | 42% ± 9% | |
liver | 7 studies | 45% ± 17% | |
bone marrow | 5 studies | 38% ± 8% | |
lymph node | 5 studies | 43% ± 5% | |
pancreas | 4 studies | 43% ± 17% | |
placenta | 4 studies | 29% ± 10% | |
heart | 4 studies | 23% ± 8% | |
uterus | 4 studies | 51% ± 17% | |
prostate | 4 studies | 23% ± 5% | |
breast | 4 studies | 34% ± 13% | |
adrenal gland | 3 studies | 43% ± 11% | |
esophagus | 3 studies | 44% ± 28% | |
skin | 3 studies | 28% ± 9% | |
thymus | 3 studies | 54% ± 21% | |
adipose | 3 studies | 24% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 2246.41 | 258 / 258 | 100% | 73.13 | 230 / 230 |
brain | 100% | 2152.67 | 2642 / 2642 | 100% | 86.12 | 705 / 705 |
esophagus | 100% | 1320.68 | 1445 / 1445 | 100% | 41.35 | 183 / 183 |
ovary | 100% | 978.94 | 180 / 180 | 100% | 112.45 | 430 / 430 |
thymus | 100% | 1674.58 | 653 / 653 | 100% | 80.56 | 605 / 605 |
prostate | 100% | 1942.77 | 245 / 245 | 100% | 98.80 | 501 / 502 |
uterus | 100% | 1229.23 | 170 / 170 | 100% | 81.83 | 458 / 459 |
pancreas | 100% | 727.54 | 327 / 328 | 100% | 54.73 | 178 / 178 |
kidney | 100% | 1865.48 | 89 / 89 | 99% | 55.20 | 895 / 901 |
skin | 100% | 1423.93 | 1808 / 1809 | 99% | 60.71 | 468 / 472 |
liver | 100% | 823.62 | 225 / 226 | 100% | 47.83 | 404 / 406 |
intestine | 100% | 1444.56 | 966 / 966 | 99% | 56.87 | 522 / 527 |
breast | 100% | 1450.87 | 459 / 459 | 99% | 58.71 | 1107 / 1118 |
stomach | 100% | 1253.93 | 359 / 359 | 99% | 51.17 | 283 / 286 |
bladder | 100% | 1337.48 | 21 / 21 | 99% | 70.77 | 498 / 504 |
lung | 99% | 1250.38 | 575 / 578 | 99% | 52.88 | 1138 / 1155 |
adipose | 100% | 1466.80 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 76.87 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 136.62 | 29 / 29 |
spleen | 100% | 1621.56 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 67.98 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 49.73 | 1 / 1 |
muscle | 100% | 1457.19 | 801 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 1312.83 | 1328 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 1296.50 | 851 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 94% | 1078.29 | 871 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0043066 | Biological process | negative regulation of apoptotic process |
GO_0005654 | Cellular component | nucleoplasm |
GO_0031417 | Cellular component | NatC complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | NAA38 |
Protein name | N-alpha-acetyltransferase 38, NatC auxiliary subunit (LSM domain-containing protein 1) (Phosphonoformate immuno-associated protein 2) N-alpha-acetyltransferase 38, NatC auxiliary subunit |
Synonyms | MAK31 LSMD1 PFAAP2 |
Description | FUNCTION: Auxillary component of the N-terminal acetyltransferase C (NatC) complex which catalyzes acetylation of N-terminal methionine residues. . FUNCTION: Auxillary component of the N-terminal acetyltransferase C (NatC) complex which catalyzes acetylation of N-terminal methionine residues. . FUNCTION: Auxillary component of the N-terminal acetyltransferase C (NatC) complex which catalyzes acetylation of N-terminal methionine residues. . FUNCTION: Auxillary component of the N-terminal acetyltransferase C (NatC) complex which catalyzes acetylation of N-terminal methionine residues. . FUNCTION: Auxillary component of the N-terminal acetyltransferase C (NatC) complex which catalyzes acetylation of N-terminal methionine residues. . |
Accessions | ENST00000333775.9 [Q9BRA0-2] ENST00000576861.5 ENST00000575071.5 ENST00000575208.2 ENST00000576384.1 I3L310 I3L3Z2 Q9BRA0 ENST00000575771.6 [Q9BRA0-1] I3L4V0 A0A0B4J297 |