Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 12 studies | 33% ± 15% | |
peripheral blood | 12 studies | 26% ± 10% | |
intestine | 8 studies | 29% ± 14% | |
eye | 8 studies | 30% ± 15% | |
kidney | 6 studies | 25% ± 12% | |
lymph node | 5 studies | 26% ± 12% | |
brain | 5 studies | 23% ± 4% | |
liver | 5 studies | 22% ± 11% | |
placenta | 4 studies | 24% ± 8% | |
bone marrow | 4 studies | 21% ± 4% | |
uterus | 4 studies | 37% ± 16% | |
breast | 4 studies | 27% ± 7% | |
adrenal gland | 3 studies | 23% ± 7% | |
skin | 3 studies | 20% ± 3% | |
prostate | 3 studies | 29% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 6551.52 | 258 / 258 | 100% | 92.55 | 230 / 230 |
esophagus | 100% | 5407.45 | 1445 / 1445 | 100% | 68.62 | 183 / 183 |
ovary | 100% | 7241.91 | 180 / 180 | 100% | 101.00 | 430 / 430 |
skin | 100% | 6260.26 | 1809 / 1809 | 100% | 103.44 | 472 / 472 |
thymus | 100% | 5629.81 | 653 / 653 | 100% | 95.78 | 605 / 605 |
uterus | 100% | 8062.84 | 170 / 170 | 100% | 118.91 | 459 / 459 |
brain | 100% | 4623.05 | 2633 / 2642 | 100% | 90.38 | 705 / 705 |
stomach | 100% | 3817.63 | 359 / 359 | 100% | 99.35 | 285 / 286 |
intestine | 100% | 5442.12 | 966 / 966 | 100% | 125.36 | 525 / 527 |
breast | 100% | 5457.95 | 459 / 459 | 100% | 83.84 | 1113 / 1118 |
kidney | 100% | 4673.18 | 89 / 89 | 99% | 57.89 | 896 / 901 |
pancreas | 100% | 2663.34 | 328 / 328 | 99% | 82.68 | 177 / 178 |
prostate | 100% | 6061.37 | 245 / 245 | 99% | 85.31 | 499 / 502 |
lung | 100% | 5590.40 | 577 / 578 | 99% | 95.78 | 1145 / 1155 |
bladder | 100% | 6568.62 | 21 / 21 | 99% | 130.25 | 498 / 504 |
liver | 100% | 2364.33 | 225 / 226 | 92% | 42.06 | 375 / 406 |
adipose | 100% | 4978.60 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 89.09 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 176.67 | 29 / 29 |
muscle | 100% | 8052.97 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 6444.31 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 117.57 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 92.01 | 1 / 1 |
blood vessel | 100% | 4340.20 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 5244.37 | 851 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 83% | 5385.33 | 767 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0051260 | Biological process | protein homooligomerization |
GO_0001701 | Biological process | in utero embryonic development |
GO_0031175 | Biological process | neuron projection development |
GO_0030510 | Biological process | regulation of BMP signaling pathway |
GO_0006974 | Biological process | DNA damage response |
GO_0045652 | Biological process | regulation of megakaryocyte differentiation |
GO_1900745 | Biological process | positive regulation of p38MAPK cascade |
GO_0006338 | Biological process | chromatin remodeling |
GO_0061431 | Biological process | cellular response to methionine |
GO_0006479 | Biological process | protein methylation |
GO_0018216 | Biological process | peptidyl-arginine methylation |
GO_0019919 | Biological process | peptidyl-arginine methylation, to asymmetrical-dimethyl arginine |
GO_0008380 | Biological process | RNA splicing |
GO_0046329 | Biological process | negative regulation of JNK cascade |
GO_0019082 | Biological process | viral protein processing |
GO_0045648 | Biological process | positive regulation of erythrocyte differentiation |
GO_1905168 | Biological process | positive regulation of double-strand break repair via homologous recombination |
GO_0045727 | Biological process | positive regulation of translation |
GO_0045653 | Biological process | negative regulation of megakaryocyte differentiation |
GO_0048738 | Biological process | cardiac muscle tissue development |
GO_0008284 | Biological process | positive regulation of cell population proliferation |
GO_0046985 | Biological process | positive regulation of hemoglobin biosynthetic process |
GO_1904263 | Biological process | positive regulation of TORC1 signaling |
GO_0007166 | Biological process | cell surface receptor signaling pathway |
GO_0005654 | Cellular component | nucleoplasm |
GO_0034709 | Cellular component | methylosome |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005765 | Cellular component | lysosomal membrane |
GO_0005634 | Cellular component | nucleus |
GO_0019899 | Molecular function | enzyme binding |
GO_0048273 | Molecular function | mitogen-activated protein kinase p38 binding |
GO_1904047 | Molecular function | S-adenosyl-L-methionine binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0035241 | Molecular function | protein-arginine omega-N monomethyltransferase activity |
GO_0042054 | Molecular function | histone methyltransferase activity |
GO_0008327 | Molecular function | methyl-CpG binding |
GO_0008168 | Molecular function | methyltransferase activity |
GO_0003723 | Molecular function | RNA binding |
GO_0008276 | Molecular function | protein methyltransferase activity |
GO_0016274 | Molecular function | protein-arginine N-methyltransferase activity |
GO_0008170 | Molecular function | N-methyltransferase activity |
GO_0106080 | Molecular function | GATOR1 complex binding |
GO_0035242 | Molecular function | protein-arginine omega-N asymmetric methyltransferase activity |
GO_0044020 | Molecular function | histone H4R3 methyltransferase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | PRMT1 |
Protein name | Protein arginine N-methyltransferase 1 transcript variant 46 Protein arginine N-methyltransferase 1 transcript variant 23 type I protein arginine methyltransferase (EC 2.1.1.319) Protein arginine N-methyltransferase 1 transcript variant 24 Protein arginine N-methyltransferase 1 transcript variant 30 Protein arginine N-methyltransferase 1 transcript variant 38 Protein arginine N-methyltransferase 1 transcript variant 48 Protein arginine N-methyltransferase 1 transcript variant 45 Protein arginine N-methyltransferase 1 transcript variant 12 Protein arginine methyltransferase 1 Protein arginine N-methyltransferase 1 transcript variant 35 Protein arginine N-methyltransferase 1 transcript variant 29 Protein arginine N-methyltransferase 1 transcript variant 18 Protein arginine N-methyltransferase 1 transcript variant 20 Protein arginine N-methyltransferase 1 transcript variant 16 Protein arginine N-methyltransferase 1 transcript variant 10 Protein arginine N-methyltransferase 1 transcript variant 25 Protein arginine N-methyltransferase 1 transcript variant 13 Protein arginine N-methyltransferase 1 transcript variant 49 Protein arginine N-methyltransferase 1 transcript variant 8 Protein arginine N-methyltransferase 1 transcript variant 27 Protein arginine N-methyltransferase 1 transcript variant 21 Protein arginine N-methyltransferase 1 transcript variant 19 Protein arginine N-methyltransferase 1 transcript variant 36 Protein arginine N-methyltransferase 1 transcript variant 42 Protein arginine N-methyltransferase 1 transcript variant 47 Protein arginine N-methyltransferase 1 transcript variant 34 Protein arginine N-methyltransferase 1 (EC 2.1.1.319) (Histone-arginine N-methyltransferase PRMT1) (Interferon receptor 1-bound protein 4) Protein arginine N-methyltransferase 1 transcript variant 32 Protein arginine N-methyltransferase 1 transcript variant 7 Protein arginine N-methyltransferase 1 transcript variant 15 Protein arginine N-methyltransferase 1 transcript variant 6 Protein arginine N-methyltransferase 1 transcript variant 44 Protein arginine N-methyltransferase 1 transcript variant 26 Protein arginine N-methyltransferase 1 transcript variant 9 Protein arginine N-methyltransferase 1 transcript variant 41 Protein arginine N-methyltransferase 1 transcript variant 33 Protein arginine N-methyltransferase 1 transcript variant 37 Protein arginine N-methyltransferase 1 transcript variant 17 |
Synonyms | IR1B4 HCP1 HRMT1L2 HMT2 ANM1 |
Description | FUNCTION: Arginine methyltransferase that methylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues present in proteins such as ESR1, histone H2, H3 and H4, FMR1, ILF3, HNRNPA1, HNRNPD, NFATC2IP, SUPT5H, TAF15, EWS, HABP4, SERBP1, RBM15, FOXO1, CHTOP, MAP3K5/ASK1 and NPRL2 . Constitutes the main enzyme that mediates monomethylation and asymmetric dimethylation of histone H4 'Arg-4' (H4R3me1 and H4R3me2a, respectively), a specific tag for epigenetic transcriptional activation. May be involved in the regulation of TAF15 transcriptional activity, act as an activator of estrogen receptor (ER)-mediated transactivation, play a key role in neurite outgrowth and act as a negative regulator of megakaryocytic differentiation, by modulating p38 MAPK pathway. Methylates RBM15, promoting ubiquitination and degradation of RBM15 . Methylates FOXO1 and retains it in the nucleus increasing its transcriptional activity . Methylates CHTOP and this methylation is critical for its 5-hydroxymethylcytosine (5hmC)-binding activity . Methylates MAP3K5/ASK1 at 'Arg-78' and 'Arg-80' which promotes association of MAP3K5 with thioredoxin and negatively regulates MAP3K5 association with TRAF2, inhibiting MAP3K5 stimulation and MAP3K5-induced activation of JNK . Methylates H4R3 in genes involved in glioblastomagenesis in a CHTOP- and/or TET1-dependent manner . Plays a role in regulating alternative splicing in the heart (By similarity). Methylates NPRL2 at 'Arg-78' leading to inhibition of its GTPase activator activity and then the GATOR1 complex and consequently inducing timely mTORC1 activation under methionine-sufficient conditions . . |
Accessions | A0A3S6H7Z6 E9PIX6 A0A3Q8AM27 ENST00000529284.5 A0A3S6H8B5 A0A3S6H8V5 ENST00000528623.5 A0A3Q8AIS8 A0A3S6H7E4 ENST00000391851.8 [Q99873-3] E9PMZ2 A0A3S6H950 ENST00000526224.5 ENST00000610806.4 [Q99873-5] A0A3S6H7K8 A0A3S6H7W7 A0A3Q8B9M7 ENST00000529836.5 A0A3S6H812 A0A3Q8B027 A0A3Q8BCJ2 E9PIE2 A0A3Q8B032 A0A3S6H7G3 A0A3S6H7X4 A0A3Q8AIR8 A0A3Q8APX7 A0A3S6H758 E9PKG1 ENST00000524771.5 A0A3S6H824 A0A3S6H7Y8 A0A3S6H7Y4 E9PMW9 A0A3Q8B9M1 A0A3Q8B4N0 A0A3Q8ATG4 A0A3Q8APW9 A0A3S6H942 A0A3S6H7E9 A0A3S6H960 A0A3S6H8W3 ENST00000532489.5 E9PNR9 H0YDE4 A0A3Q8BCI7 A0A3S6H767 A0A3S6H7X9 ENST00000454376.7 [Q99873-1] A0A3Q8AIS5 A0A3S6H8A6 Q99873 A0A3Q8AX95 A0A3Q8B022 E9PQ98 A0A3Q8ATF5 A0A3Q8AX88 ENST00000534465.6 A0A3S6H765 A0A3Q8APY3 A0A3Q8B4M4 ENST00000534280.5 A0A3S6H761 A0A3Q8AIS2 ENST00000527382.5 A0A3Q8AM22 |