Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 18 studies | 49% ± 20% | |
peripheral blood | 17 studies | 68% ± 14% | |
intestine | 15 studies | 56% ± 25% | |
kidney | 7 studies | 66% ± 14% | |
eye | 7 studies | 38% ± 24% | |
pancreas | 5 studies | 59% ± 15% | |
bone marrow | 5 studies | 49% ± 26% | |
uterus | 5 studies | 77% ± 18% | |
brain | 5 studies | 43% ± 28% | |
lymph node | 4 studies | 70% ± 25% | |
placenta | 4 studies | 81% ± 18% | |
liver | 4 studies | 71% ± 16% | |
prostate | 4 studies | 70% ± 25% | |
breast | 4 studies | 62% ± 19% | |
esophagus | 3 studies | 70% ± 15% | |
skin | 3 studies | 69% ± 6% | |
thymus | 3 studies | 69% ± 22% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 11943.20 | 1444 / 1445 | 99% | 4.25 | 181 / 183 |
uterus | 100% | 15208.98 | 170 / 170 | 94% | 2.30 | 432 / 459 |
bladder | 100% | 13958.90 | 21 / 21 | 92% | 2.41 | 462 / 504 |
intestine | 100% | 12469.00 | 966 / 966 | 90% | 2.80 | 474 / 527 |
ovary | 100% | 30848.17 | 180 / 180 | 89% | 2.44 | 383 / 430 |
stomach | 100% | 9658.30 | 359 / 359 | 88% | 2.94 | 252 / 286 |
breast | 100% | 16564.62 | 459 / 459 | 87% | 2.11 | 968 / 1118 |
lung | 100% | 10249.39 | 576 / 578 | 83% | 2.32 | 957 / 1155 |
pancreas | 100% | 13277.77 | 328 / 328 | 79% | 1.64 | 141 / 178 |
prostate | 100% | 12619.24 | 245 / 245 | 75% | 1.40 | 378 / 502 |
brain | 99% | 6126.62 | 2616 / 2642 | 71% | 1.36 | 503 / 705 |
skin | 100% | 20216.68 | 1807 / 1809 | 67% | 1.50 | 317 / 472 |
kidney | 100% | 9269.60 | 89 / 89 | 49% | 0.92 | 438 / 901 |
thymus | 100% | 9708.23 | 652 / 653 | 47% | 0.76 | 286 / 605 |
adrenal gland | 100% | 9072.71 | 258 / 258 | 46% | 0.69 | 106 / 230 |
liver | 92% | 4031.92 | 207 / 226 | 24% | 0.47 | 99 / 406 |
spleen | 100% | 14326.68 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.06 | 1 / 1 |
blood vessel | 100% | 10200.38 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 14701.87 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 99% | 8717.62 | 791 / 803 | 0% | 0 | 0 / 0 |
heart | 94% | 5430.62 | 811 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 90% | 2.14 | 26 / 29 |
tonsil | 0% | 0 | 0 / 0 | 64% | 1.34 | 29 / 45 |
eye | 0% | 0 | 0 / 0 | 49% | 1.12 | 39 / 80 |
peripheral blood | 39% | 8579.84 | 366 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006412 | Biological process | translation |
GO_0002181 | Biological process | cytoplasmic translation |
GO_0022626 | Cellular component | cytosolic ribosome |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005829 | Cellular component | cytosol |
GO_0005886 | Cellular component | plasma membrane |
GO_0005840 | Cellular component | ribosome |
GO_0022625 | Cellular component | cytosolic large ribosomal subunit |
GO_0003735 | Molecular function | structural constituent of ribosome |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | RPL36A |
Protein name | Large ribosomal subunit protein eL42 (60S ribosomal protein L36a) (60S ribosomal protein L44) (Cell growth-inhibiting gene 15 protein) (Cell migration-inducing gene 6 protein) Large ribosomal subunit protein eL42 (60S ribosomal protein L36a) Ribosomal protein L36a |
Synonyms | MIG6 RPL44 GIG15 |
Description | FUNCTION: Component of the large ribosomal subunit. The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. . |
Accessions | J3KQN4 H7BY91 ENST00000427805.6 H0Y5B4 ENST00000553110.8 R4GN19 ENST00000392994.7 ENST00000372849.8 ENST00000614077.4 ENST00000471855.1 P83881 |