Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 11 studies | 37% ± 14% | |
astrocyte | 10 studies | 27% ± 9% | |
endothelial cell | 8 studies | 25% ± 8% | |
epithelial cell | 7 studies | 33% ± 12% | |
pericyte | 6 studies | 22% ± 3% | |
basal cell | 4 studies | 29% ± 10% | |
connective tissue cell | 3 studies | 26% ± 9% | |
endothelial cell of artery | 3 studies | 20% ± 4% | |
fibroblast | 3 studies | 20% ± 4% | |
ciliated cell | 3 studies | 30% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 601.24 | 459 / 459 | 100% | 12.19 | 1118 / 1118 |
esophagus | 100% | 494.32 | 1444 / 1445 | 100% | 9.74 | 183 / 183 |
brain | 100% | 544.65 | 2639 / 2642 | 100% | 7.24 | 705 / 705 |
ovary | 100% | 693.43 | 180 / 180 | 100% | 8.35 | 429 / 430 |
intestine | 100% | 531.47 | 966 / 966 | 100% | 8.49 | 525 / 527 |
skin | 100% | 814.13 | 1809 / 1809 | 100% | 9.84 | 470 / 472 |
bladder | 100% | 490.81 | 21 / 21 | 99% | 7.77 | 500 / 504 |
uterus | 100% | 567.38 | 170 / 170 | 99% | 7.94 | 455 / 459 |
lung | 99% | 452.20 | 574 / 578 | 99% | 7.60 | 1148 / 1155 |
stomach | 99% | 414.77 | 356 / 359 | 99% | 8.85 | 284 / 286 |
prostate | 100% | 484.38 | 245 / 245 | 97% | 5.13 | 488 / 502 |
thymus | 100% | 433.95 | 653 / 653 | 97% | 4.72 | 588 / 605 |
pancreas | 100% | 369.68 | 327 / 328 | 97% | 5.88 | 173 / 178 |
kidney | 100% | 365.70 | 89 / 89 | 93% | 4.54 | 836 / 901 |
liver | 97% | 238.32 | 219 / 226 | 69% | 2.81 | 281 / 406 |
adrenal gland | 100% | 454.39 | 257 / 258 | 61% | 2.06 | 140 / 230 |
adipose | 100% | 521.67 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 425.75 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 6.75 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.12 | 1 / 1 |
muscle | 100% | 389.29 | 799 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 293.53 | 1323 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 284.97 | 841 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 8.49 | 78 / 80 |
lymph node | 0% | 0 | 0 / 0 | 97% | 5.06 | 28 / 29 |
peripheral blood | 54% | 308.58 | 502 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005730 | Cellular component | nucleolus |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | KNOP1 |
Protein name | Lysine rich nucleolar protein 1 Lysine-rich nucleolar protein 1 (Protein FAM191A) (Testis-specific gene 118 protein) |
Synonyms | FAM191A TSG118 C16orf88 |
Description | |
Accessions | H3BNU8 H3BMC9 ENST00000568230.5 ENST00000564480.1 Q1ED39 ENST00000219837.12 ENST00000567367.1 H3BPL4 |