Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 5 studies | 28% ± 8% | |
classical monocyte | 3 studies | 20% ± 3% | |
macrophage | 3 studies | 18% ± 2% | |
dendritic cell | 3 studies | 23% ± 4% |
Insufficient scRNA-seq data for expression of DDX41 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3157.36 | 1445 / 1445 | 100% | 44.30 | 183 / 183 |
liver | 100% | 2217.93 | 226 / 226 | 100% | 49.11 | 406 / 406 |
ovary | 100% | 3669.32 | 180 / 180 | 100% | 61.85 | 430 / 430 |
pancreas | 100% | 1992.52 | 328 / 328 | 100% | 53.54 | 178 / 178 |
skin | 100% | 4247.21 | 1809 / 1809 | 100% | 76.70 | 472 / 472 |
thymus | 100% | 4389.70 | 653 / 653 | 100% | 57.44 | 605 / 605 |
uterus | 100% | 3530.68 | 170 / 170 | 100% | 68.15 | 459 / 459 |
brain | 100% | 3821.31 | 2640 / 2642 | 100% | 74.93 | 705 / 705 |
kidney | 100% | 3693.31 | 89 / 89 | 100% | 75.94 | 900 / 901 |
lung | 100% | 3370.16 | 578 / 578 | 100% | 51.99 | 1152 / 1155 |
intestine | 100% | 3017.38 | 966 / 966 | 100% | 59.03 | 525 / 527 |
adrenal gland | 100% | 3551.89 | 258 / 258 | 100% | 57.79 | 229 / 230 |
breast | 100% | 3498.87 | 459 / 459 | 100% | 63.40 | 1113 / 1118 |
prostate | 100% | 3962.48 | 245 / 245 | 99% | 60.28 | 499 / 502 |
stomach | 100% | 2570.65 | 359 / 359 | 99% | 50.32 | 284 / 286 |
bladder | 100% | 3093.81 | 21 / 21 | 99% | 60.10 | 500 / 504 |
adipose | 100% | 3348.81 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 98.72 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 96.50 | 29 / 29 |
spleen | 100% | 4757.49 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 62.94 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 30.87 | 1 / 1 |
blood vessel | 100% | 2861.37 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 1967.62 | 799 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 4040.91 | 923 / 929 | 0% | 0 | 0 / 0 |
heart | 99% | 1710.23 | 849 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0000398 | Biological process | mRNA splicing, via spliceosome |
GO_0006915 | Biological process | apoptotic process |
GO_0008283 | Biological process | cell population proliferation |
GO_0030154 | Biological process | cell differentiation |
GO_0071013 | Cellular component | catalytic step 2 spliceosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0016020 | Cellular component | membrane |
GO_0005681 | Cellular component | spliceosomal complex |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0016887 | Molecular function | ATP hydrolysis activity |
GO_0003729 | Molecular function | mRNA binding |
GO_0003724 | Molecular function | RNA helicase activity |
GO_0046872 | Molecular function | metal ion binding |
GO_0005524 | Molecular function | ATP binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | DDX41 |
Protein name | Probable ATP-dependent RNA helicase DDX41 (EC 3.6.4.13) (DEAD box protein 41) (DEAD box protein abstrakt homolog) DEAD-box helicase 41 RNA helicase (EC 3.6.4.13) |
Synonyms | ABS hCG_2039392 |
Description | FUNCTION: Probable ATP-dependent RNA helicase. Is required during post-transcriptional gene expression. May be involved in pre-mRNA splicing. . |
Accessions | ENST00000504781.5 ENST00000509576.5 ENST00000625286.1 ENST00000507955.6 H0YA06 Q9UJV9 D6RD33 ENST00000629036.2 ENST00000510171.3 A0A499FJW5 D6RGI7 H0Y8L8 ENST00000508279.5 B3KRK2 ENST00000330503.12 |