Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 19 studies | 82% ± 21% | |
peripheral blood | 19 studies | 90% ± 14% | |
intestine | 15 studies | 79% ± 25% | |
brain | 14 studies | 37% ± 21% | |
eye | 10 studies | 59% ± 23% | |
kidney | 8 studies | 78% ± 23% | |
liver | 7 studies | 66% ± 26% | |
bone marrow | 6 studies | 90% ± 10% | |
uterus | 6 studies | 84% ± 21% | |
pancreas | 5 studies | 86% ± 17% | |
lymph node | 5 studies | 83% ± 30% | |
placenta | 4 studies | 88% ± 19% | |
heart | 4 studies | 42% ± 20% | |
adipose | 4 studies | 43% ± 31% | |
esophagus | 4 studies | 70% ± 25% | |
prostate | 4 studies | 93% ± 11% | |
breast | 4 studies | 96% ± 4% | |
ovary | 3 studies | 76% ± 30% | |
skin | 3 studies | 85% ± 17% | |
stomach | 3 studies | 64% ± 23% | |
thymus | 3 studies | 76% ± 33% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 21443.64 | 1445 / 1445 | 100% | 402.16 | 183 / 183 |
ovary | 100% | 53993.14 | 180 / 180 | 100% | 985.12 | 430 / 430 |
pancreas | 100% | 23895.25 | 328 / 328 | 100% | 495.41 | 178 / 178 |
prostate | 100% | 23706.86 | 245 / 245 | 100% | 856.37 | 502 / 502 |
uterus | 100% | 30407.35 | 170 / 170 | 100% | 837.27 | 459 / 459 |
thymus | 100% | 19496.86 | 653 / 653 | 100% | 627.13 | 604 / 605 |
breast | 100% | 30788.25 | 459 / 459 | 100% | 605.69 | 1116 / 1118 |
intestine | 100% | 21847.01 | 966 / 966 | 100% | 601.39 | 526 / 527 |
bladder | 100% | 22504.76 | 21 / 21 | 100% | 617.02 | 503 / 504 |
skin | 100% | 28852.09 | 1809 / 1809 | 100% | 474.52 | 471 / 472 |
stomach | 100% | 19203.10 | 359 / 359 | 100% | 500.83 | 285 / 286 |
lung | 99% | 17794.94 | 575 / 578 | 100% | 650.32 | 1155 / 1155 |
kidney | 100% | 16683.74 | 89 / 89 | 99% | 421.67 | 895 / 901 |
brain | 99% | 10350.39 | 2626 / 2642 | 100% | 343.32 | 703 / 705 |
liver | 99% | 7816.90 | 223 / 226 | 99% | 335.51 | 400 / 406 |
adrenal gland | 100% | 20573.51 | 258 / 258 | 97% | 303.59 | 223 / 230 |
adipose | 100% | 25987.87 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 22448.31 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 556.18 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 1015.27 | 29 / 29 |
spleen | 100% | 21812.07 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 793.76 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 432.88 | 1 / 1 |
heart | 99% | 13912.96 | 853 / 861 | 0% | 0 | 0 / 0 |
muscle | 99% | 12556.66 | 792 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 77% | 13558.33 | 717 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006412 | Biological process | translation |
GO_0042273 | Biological process | ribosomal large subunit biogenesis |
GO_0006364 | Biological process | rRNA processing |
GO_0002181 | Biological process | cytoplasmic translation |
GO_0022626 | Cellular component | cytosolic ribosome |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005829 | Cellular component | cytosol |
GO_0016020 | Cellular component | membrane |
GO_0022625 | Cellular component | cytosolic large ribosomal subunit |
GO_0005737 | Cellular component | cytoplasm |
GO_0000049 | Molecular function | tRNA binding |
GO_0003735 | Molecular function | structural constituent of ribosome |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | RPL35A |
Protein name | Large ribosomal subunit protein eL33 (60S ribosomal protein L35a) Large ribosomal subunit protein eL33 (60S ribosomal protein L35a) (Cell growth-inhibiting gene 33 protein) |
Synonyms | GIG33 |
Description | FUNCTION: Component of the large ribosomal subunit . The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell . Required for the proliferation and viability of hematopoietic cells . . |
Accessions | ENST00000647248.2 ENST00000442341.5 P18077 ENST00000429437.5 C9K025 F8WB72 F8WBS5 ENST00000439255.1 ENST00000448864.6 |