RPL4 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
B cell	48 studies	83% ± 18%	Explore
natural killer cell	41 studies	74% ± 20%	Explore
T cell	40 studies	72% ± 26%	Explore
macrophage	40 studies	68% ± 23%	Explore
fibroblast	40 studies	70% ± 27%	Explore
endothelial cell	39 studies	64% ± 24%	Explore
CD8-positive, alpha-beta T cell	39 studies	74% ± 23%	Explore
CD4-positive, alpha-beta T cell	36 studies	84% ± 19%	Explore
pericyte	32 studies	71% ± 27%	Explore
conventional dendritic cell	30 studies	89% ± 11%	Explore
plasmacytoid dendritic cell	29 studies	85% ± 19%	Explore
dendritic cell	28 studies	79% ± 24%	Explore
smooth muscle cell	26 studies	79% ± 22%	Explore
classical monocyte	26 studies	75% ± 18%	Explore
regulatory T cell	26 studies	87% ± 13%	Explore
plasma cell	25 studies	80% ± 18%	Explore
monocyte	24 studies	67% ± 24%	Explore
non-classical monocyte	24 studies	82% ± 13%	Explore
mature NK T cell	23 studies	70% ± 21%	Explore
epithelial cell	23 studies	78% ± 22%	Explore
endothelial cell of lymphatic vessel	22 studies	76% ± 20%	Explore
basal cell	21 studies	82% ± 21%	Explore
gamma-delta T cell	20 studies	84% ± 13%	Explore
memory B cell	20 studies	94% ± 7%	Explore
mast cell	19 studies	67% ± 22%	Explore
naive B cell	19 studies	85% ± 19%	Explore
connective tissue cell	19 studies	82% ± 18%	Explore
mucosal invariant T cell	16 studies	84% ± 15%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	16 studies	89% ± 14%	Explore
ciliated cell	16 studies	68% ± 19%	Explore
CD16-negative, CD56-bright natural killer cell, human	15 studies	77% ± 20%	Explore
CD16-positive, CD56-dim natural killer cell, human	15 studies	73% ± 17%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	14 studies	95% ± 4%	Explore
capillary endothelial cell	14 studies	53% ± 22%	Explore
vein endothelial cell	14 studies	63% ± 26%	Explore
CD8-positive, alpha-beta memory T cell	13 studies	82% ± 16%	Explore
endothelial cell of artery	13 studies	61% ± 22%	Explore
myofibroblast cell	13 studies	80% ± 23%	Explore
myeloid cell	13 studies	78% ± 19%	Explore
effector memory CD8-positive, alpha-beta T cell	12 studies	73% ± 23%	Explore
innate lymphoid cell	12 studies	83% ± 13%	Explore
plasmablast	12 studies	87% ± 8%	Explore
CD4-positive, alpha-beta memory T cell	12 studies	84% ± 14%	Explore
secretory cell	12 studies	84% ± 17%	Explore
erythrocyte	12 studies	57% ± 26%	Explore
progenitor cell	11 studies	79% ± 27%	Explore
goblet cell	11 studies	62% ± 21%	Explore
mesothelial cell	11 studies	79% ± 26%	Explore
endothelial cell of vascular tree	11 studies	81% ± 23%	Explore
T follicular helper cell	10 studies	90% ± 7%	Explore
IgG plasma cell	10 studies	66% ± 24%	Explore
type I pneumocyte	9 studies	56% ± 26%	Explore
type II pneumocyte	9 studies	75% ± 25%	Explore
leukocyte	9 studies	75% ± 25%	Explore
neuron	9 studies	61% ± 27%	Explore
IgA plasma cell	9 studies	65% ± 26%	Explore
club cell	8 studies	75% ± 20%	Explore
platelet	8 studies	56% ± 20%	Explore
neutrophil	8 studies	57% ± 21%	Explore
abnormal cell	8 studies	75% ± 23%	Explore
hematopoietic stem cell	8 studies	91% ± 20%	Explore
respiratory goblet cell	7 studies	67% ± 18%	Explore
mononuclear phagocyte	7 studies	72% ± 26%	Explore
epithelial cell of proximal tubule	7 studies	67% ± 15%	Explore
transit amplifying cell	7 studies	69% ± 22%	Explore
microglial cell	7 studies	56% ± 26%	Explore
alveolar macrophage	6 studies	68% ± 22%	Explore
ionocyte	6 studies	64% ± 12%	Explore
kidney loop of Henle epithelial cell	6 studies	67% ± 14%	Explore
renal alpha-intercalated cell	6 studies	89% ± 8%	Explore
megakaryocyte	6 studies	67% ± 24%	Explore
astrocyte	6 studies	28% ± 10%	Explore
enterocyte	6 studies	48% ± 19%	Explore
enteroendocrine cell	6 studies	72% ± 27%	Explore
erythroblast	6 studies	72% ± 25%	Explore
intestinal crypt stem cell	6 studies	73% ± 30%	Explore
glutamatergic neuron	6 studies	32% ± 11%	Explore
retinal rod cell	6 studies	37% ± 21%	Explore
precursor B cell	6 studies	91% ± 7%	Explore
brush cell	6 studies	67% ± 29%	Explore
immature B cell	6 studies	94% ± 4%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	92% ± 9%	Explore
effector CD8-positive, alpha-beta T cell	6 studies	87% ± 9%	Explore
CD4-positive helper T cell	5 studies	80% ± 9%	Explore
central memory CD8-positive, alpha-beta T cell	5 studies	86% ± 14%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	72% ± 15%	Explore
hematopoietic precursor cell	5 studies	89% ± 12%	Explore
kidney distal convoluted tubule epithelial cell	5 studies	81% ± 15%	Explore
retinal ganglion cell	5 studies	44% ± 33%	Explore
lymphocyte	5 studies	74% ± 29%	Explore
T-helper 17 cell	5 studies	95% ± 7%	Explore
group 3 innate lymphoid cell	5 studies	93% ± 4%	Explore
double negative thymocyte	5 studies	91% ± 6%	Explore
effector CD4-positive, alpha-beta T cell	5 studies	81% ± 31%	Explore
granulocyte	5 studies	80% ± 16%	Explore
intermediate monocyte	5 studies	65% ± 30%	Explore
CD4-positive, alpha-beta cytotoxic T cell	4 studies	64% ± 29%	Explore
deuterosomal cell	4 studies	67% ± 15%	Explore
duct epithelial cell	4 studies	87% ± 8%	Explore
exhausted T cell	4 studies	83% ± 11%	Explore
precursor cell	4 studies	77% ± 32%	Explore
pancreatic A cell	4 studies	90% ± 8%	Explore
type B pancreatic cell	4 studies	88% ± 14%	Explore
glomerular endothelial cell	4 studies	48% ± 19%	Explore
oligodendrocyte	4 studies	21% ± 3%	Explore
OFF-bipolar cell	4 studies	46% ± 26%	Explore
ON-bipolar cell	4 studies	45% ± 28%	Explore
retinal cone cell	4 studies	53% ± 27%	Explore
pro-B cell	4 studies	92% ± 4%	Explore
neuroendocrine cell	4 studies	86% ± 8%	Explore
adventitial cell	4 studies	73% ± 12%	Explore
mucus secreting cell	4 studies	72% ± 31%	Explore
inflammatory macrophage	4 studies	67% ± 17%	Explore
acinar cell	4 studies	90% ± 9%	Explore
germinal center B cell	4 studies	93% ± 4%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	92% ± 7%	Explore
hepatocyte	4 studies	55% ± 30%	Explore
IgM plasma cell	4 studies	69% ± 24%	Explore
GABAergic neuron	4 studies	29% ± 2%	Explore
megakaryocyte-erythroid progenitor cell	4 studies	83% ± 28%	Explore
glial cell	4 studies	56% ± 30%	Explore
melanocyte	4 studies	71% ± 21%	Explore
interneuron	4 studies	43% ± 27%	Explore
T-helper 1 cell	4 studies	96% ± 2%	Explore
squamous epithelial cell	3 studies	48% ± 24%	Explore
pancreatic D cell	3 studies	94% ± 6%	Explore
kidney connecting tubule epithelial cell	3 studies	73% ± 17%	Explore
podocyte	3 studies	88% ± 8%	Explore
renal beta-intercalated cell	3 studies	97% ± 2%	Explore
neural crest cell	3 studies	98% ± 2%	Explore
paneth cell	3 studies	76% ± 13%	Explore
renal principal cell	3 studies	63% ± 13%	Explore
thymocyte	3 studies	95% ± 4%	Explore
extravillous trophoblast	3 studies	99% ± 1%	Explore
placental villous trophoblast	3 studies	98% ± 1%	Explore
common myeloid progenitor	3 studies	66% ± 35%	Explore
serous secreting cell	3 studies	80% ± 7%	Explore
tissue-resident macrophage	3 studies	62% ± 28%	Explore
follicular B cell	3 studies	91% ± 6%	Explore
intraepithelial lymphocyte	3 studies	88% ± 6%	Explore
Mueller cell	3 studies	47% ± 9%	Explore
amacrine cell	3 studies	48% ± 21%	Explore
retina horizontal cell	3 studies	29% ± 8%	Explore
rod bipolar cell	3 studies	45% ± 19%	Explore
muscle cell	3 studies	57% ± 19%	Explore
myoepithelial cell	3 studies	94% ± 2%	Explore
luminal cell of prostate epithelium	3 studies	93% ± 4%	Explore
pancreatic ductal cell	3 studies	92% ± 5%	Explore
oligodendrocyte precursor cell	3 studies	57% ± 30%	Explore
granulocyte monocyte progenitor cell	3 studies	76% ± 29%	Explore
keratinocyte	3 studies	92% ± 9%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	95% ± 3%	Explore
double-positive, alpha-beta thymocyte	3 studies	94% ± 1%	Explore
progenitor cell of mammary luminal epithelium	3 studies	94% ± 7%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
peripheral blood	19 studies	83% ± 12%	Explore
lung	18 studies	72% ± 19%	Explore
intestine	14 studies	65% ± 27%	Explore
brain	11 studies	34% ± 17%	Explore
eye	10 studies	40% ± 22%	Explore
kidney	8 studies	68% ± 20%	Explore
bone marrow	6 studies	79% ± 15%	Explore
liver	6 studies	63% ± 22%	Explore
pancreas	5 studies	85% ± 15%	Explore
uterus	5 studies	84% ± 14%	Explore
lymph node	4 studies	93% ± 4%	Explore
placenta	4 studies	84% ± 15%	Explore
prostate	4 studies	79% ± 31%	Explore
breast	4 studies	86% ± 7%	Explore
heart	3 studies	39% ± 16%	Explore
adipose	3 studies	50% ± 22%	Explore
esophagus	3 studies	80% ± 19%	Explore
skin	3 studies	76% ± 14%	Explore
thymus	3 studies	82% ± 22%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	83843.38	1445 / 1445	100%	633.06	183 / 183
ovary	100%	159204.14	180 / 180	100%	1023.59	430 / 430
pancreas	100%	74721.34	328 / 328	100%	697.61	178 / 178
prostate	100%	87425.09	245 / 245	100%	1202.70	502 / 502
skin	100%	134423.79	1809 / 1809	100%	1108.65	472 / 472
stomach	100%	64602.84	359 / 359	100%	742.90	286 / 286
thymus	100%	72342.03	653 / 653	100%	1089.56	605 / 605
uterus	100%	104099.46	170 / 170	100%	951.67	459 / 459
bladder	100%	95806.71	21 / 21	100%	843.52	503 / 504
kidney	100%	66002.91	89 / 89	100%	662.33	899 / 901
intestine	100%	84384.27	965 / 966	100%	862.74	526 / 527
breast	100%	96727.59	459 / 459	100%	777.54	1113 / 1118
lung	99%	61870.25	575 / 578	100%	733.66	1155 / 1155
brain	99%	43789.04	2627 / 2642	100%	752.54	704 / 705
liver	98%	31304.53	222 / 226	100%	531.89	405 / 406
adrenal gland	100%	57379.84	258 / 258	97%	625.71	224 / 230
adipose	100%	93473.72	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	1763.67	29 / 29
muscle	100%	82808.23	803 / 803	0%	0	0 / 0
spleen	100%	64587.30	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	795.38	45 / 45
ureter	0%	0	0 / 0	100%	831.97	1 / 1
blood vessel	100%	85722.96	1334 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	99%	1631.27	79 / 80
heart	96%	44223.81	827 / 861	0%	0	0 / 0
peripheral blood	96%	76279.46	890 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0006412	Biological process	translation
GO_0002181	Biological process	cytoplasmic translation
GO_0005730	Cellular component	nucleolus
GO_0022626	Cellular component	cytosolic ribosome
GO_0070062	Cellular component	extracellular exosome
GO_1990904	Cellular component	ribonucleoprotein complex
GO_0005829	Cellular component	cytosol
GO_0005791	Cellular component	rough endoplasmic reticulum
GO_0016020	Cellular component	membrane
GO_0005925	Cellular component	focal adhesion
GO_0022625	Cellular component	cytosolic large ribosomal subunit
GO_0005737	Cellular component	cytoplasm
GO_0005634	Cellular component	nucleus
GO_0003735	Molecular function	structural constituent of ribosome
GO_0005515	Molecular function	protein binding
GO_0003723	Molecular function	RNA binding

Gene name	RPL4
Protein name	Large ribosomal subunit protein uL4 (60S ribosomal protein L1) (60S ribosomal protein L4) Ribosomal protein L4 Large ribosomal subunit protein uL4 (60S ribosomal protein L4)
Synonyms	RPL1 hCG_2004318
Description	FUNCTION: Component of the large ribosomal subunit. The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. .
Accessions	P36578 ENST00000307961.11 ENST00000568588.5 H3BM89 ENST00000569438.2 H3BU31 ENST00000569696.5 H3BTP7

RPL4 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review