PDIA4 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
plasma cell	25 studies	50% ± 24%	Explore
fibroblast	24 studies	26% ± 12%	Explore
macrophage	20 studies	25% ± 10%	Explore
natural killer cell	20 studies	21% ± 5%	Explore
endothelial cell	18 studies	27% ± 10%	Explore
plasmacytoid dendritic cell	16 studies	42% ± 13%	Explore
ciliated cell	14 studies	39% ± 16%	Explore
epithelial cell	13 studies	40% ± 22%	Explore
plasmablast	12 studies	62% ± 28%	Explore
CD8-positive, alpha-beta T cell	12 studies	21% ± 4%	Explore
CD16-positive, CD56-dim natural killer cell, human	10 studies	22% ± 5%	Explore
basal cell	9 studies	33% ± 15%	Explore
myofibroblast cell	9 studies	25% ± 9%	Explore
connective tissue cell	9 studies	38% ± 11%	Explore
goblet cell	9 studies	33% ± 10%	Explore
pericyte	9 studies	27% ± 6%	Explore
smooth muscle cell	9 studies	21% ± 5%	Explore
IgA plasma cell	9 studies	44% ± 20%	Explore
mucosal invariant T cell	9 studies	22% ± 5%	Explore
conventional dendritic cell	8 studies	24% ± 10%	Explore
IgG plasma cell	8 studies	43% ± 19%	Explore
CD16-negative, CD56-bright natural killer cell, human	8 studies	21% ± 4%	Explore
CD4-positive, alpha-beta T cell	8 studies	20% ± 5%	Explore
gamma-delta T cell	8 studies	23% ± 8%	Explore
abnormal cell	7 studies	28% ± 9%	Explore
secretory cell	6 studies	25% ± 9%	Explore
mature NK T cell	6 studies	20% ± 4%	Explore
vein endothelial cell	6 studies	24% ± 9%	Explore
endothelial cell of lymphatic vessel	6 studies	25% ± 6%	Explore
CD4-positive, alpha-beta memory T cell	5 studies	20% ± 2%	Explore
club cell	5 studies	27% ± 9%	Explore
hematopoietic precursor cell	5 studies	25% ± 8%	Explore
progenitor cell	5 studies	38% ± 9%	Explore
endothelial cell of artery	5 studies	25% ± 7%	Explore
mesothelial cell	5 studies	36% ± 18%	Explore
monocyte	5 studies	24% ± 7%	Explore
transit amplifying cell	5 studies	28% ± 10%	Explore
dendritic cell	5 studies	33% ± 13%	Explore
regulatory T cell	5 studies	18% ± 3%	Explore
respiratory goblet cell	4 studies	32% ± 18%	Explore
non-classical monocyte	4 studies	21% ± 3%	Explore
T cell	4 studies	27% ± 4%	Explore
enterocyte	4 studies	22% ± 4%	Explore
myeloid cell	4 studies	29% ± 8%	Explore
capillary endothelial cell	4 studies	24% ± 8%	Explore
adventitial cell	4 studies	28% ± 4%	Explore
effector CD8-positive, alpha-beta T cell	4 studies	24% ± 6%	Explore
hepatocyte	4 studies	44% ± 26%	Explore
IgM plasma cell	4 studies	41% ± 21%	Explore
CD8-positive, alpha-beta memory T cell	4 studies	19% ± 3%	Explore
duct epithelial cell	3 studies	20% ± 2%	Explore
classical monocyte	3 studies	28% ± 7%	Explore
intestinal crypt stem cell	3 studies	26% ± 6%	Explore
leukocyte	3 studies	23% ± 8%	Explore
neural crest cell	3 studies	22% ± 2%	Explore
extravillous trophoblast	3 studies	66% ± 5%	Explore
placental villous trophoblast	3 studies	33% ± 11%	Explore
type I pneumocyte	3 studies	35% ± 13%	Explore
type II pneumocyte	3 studies	40% ± 18%	Explore
effector CD4-positive, alpha-beta T cell	3 studies	18% ± 3%	Explore
endothelial cell of vascular tree	3 studies	21% ± 1%	Explore
exhausted T cell	3 studies	19% ± 4%	Explore
effector memory CD4-positive, alpha-beta T cell	3 studies	17% ± 1%	Explore
granulocyte monocyte progenitor cell	3 studies	48% ± 15%	Explore
enteroendocrine cell	3 studies	31% ± 7%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	3 studies	18% ± 2%	Explore
mast cell	3 studies	24% ± 6%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	3 studies	20% ± 5%	Explore
double negative thymocyte	3 studies	24% ± 7%	Explore
effector memory CD8-positive, alpha-beta T cell	3 studies	19% ± 3%	Explore
luminal cell of prostate epithelium	3 studies	23% ± 4%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	9 studies	30% ± 9%	Explore
peripheral blood	9 studies	18% ± 2%	Explore
intestine	8 studies	26% ± 10%	Explore
liver	5 studies	26% ± 8%	Explore
kidney	4 studies	21% ± 6%	Explore
pancreas	3 studies	25% ± 6%	Explore
placenta	3 studies	42% ± 14%	Explore
bone marrow	3 studies	19% ± 4%	Explore
brain	3 studies	21% ± 3%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
liver	100%	18874.81	226 / 226	100%	383.73	406 / 406
stomach	100%	5651.27	358 / 359	100%	334.01	286 / 286
uterus	100%	6167.95	170 / 170	100%	365.86	457 / 459
ovary	100%	6379.26	180 / 180	100%	321.57	428 / 430
breast	100%	4918.25	459 / 459	99%	294.54	1112 / 1118
prostate	100%	6738.28	245 / 245	99%	432.55	499 / 502
lung	100%	7333.77	577 / 578	100%	458.49	1150 / 1155
thymus	100%	18723.34	653 / 653	99%	423.02	599 / 605
pancreas	100%	8496.93	328 / 328	99%	284.04	176 / 178
intestine	100%	5849.27	966 / 966	99%	404.21	521 / 527
esophagus	100%	3805.60	1441 / 1445	99%	239.04	181 / 183
bladder	100%	5828.05	21 / 21	99%	371.75	497 / 504
skin	100%	9003.86	1804 / 1809	97%	345.00	460 / 472
kidney	100%	6326.43	89 / 89	93%	207.64	837 / 901
adrenal gland	98%	4172.43	252 / 258	69%	78.57	159 / 230
brain	69%	1460.24	1821 / 2642	83%	147.98	584 / 705
lymph node	0%	0	0 / 0	100%	188.10	29 / 29
spleen	100%	8917.02	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	233.75	45 / 45
ureter	0%	0	0 / 0	100%	185.47	1 / 1
adipose	100%	5156.16	1201 / 1204	0%	0	0 / 0
blood vessel	99%	4958.99	1324 / 1335	0%	0	0 / 0
heart	88%	3227.92	757 / 861	0%	0	0 / 0
peripheral blood	79%	4772.76	736 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	60%	59.71	48 / 80
muscle	15%	234.06	124 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0