RPL23A | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
B cell	48 studies	92% ± 15%	Explore
macrophage	42 studies	76% ± 24%	Explore
natural killer cell	42 studies	91% ± 14%	Explore
endothelial cell	42 studies	72% ± 28%	Explore
T cell	40 studies	82% ± 24%	Explore
fibroblast	40 studies	82% ± 25%	Explore
CD8-positive, alpha-beta T cell	39 studies	89% ± 19%	Explore
CD4-positive, alpha-beta T cell	35 studies	92% ± 13%	Explore
pericyte	34 studies	82% ± 25%	Explore
conventional dendritic cell	31 studies	93% ± 7%	Explore
plasmacytoid dendritic cell	29 studies	93% ± 9%	Explore
dendritic cell	27 studies	84% ± 23%	Explore
smooth muscle cell	27 studies	86% ± 22%	Explore
plasma cell	26 studies	85% ± 20%	Explore
endothelial cell of lymphatic vessel	26 studies	79% ± 27%	Explore
regulatory T cell	26 studies	93% ± 11%	Explore
monocyte	25 studies	76% ± 23%	Explore
classical monocyte	25 studies	86% ± 11%	Explore
mature NK T cell	25 studies	86% ± 20%	Explore
epithelial cell	25 studies	81% ± 25%	Explore
non-classical monocyte	23 studies	90% ± 11%	Explore
mast cell	22 studies	80% ± 19%	Explore
memory B cell	21 studies	97% ± 5%	Explore
basal cell	21 studies	86% ± 21%	Explore
gamma-delta T cell	20 studies	93% ± 9%	Explore
connective tissue cell	19 studies	89% ± 15%	Explore
naive B cell	18 studies	95% ± 7%	Explore
mucosal invariant T cell	17 studies	93% ± 10%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	16 studies	94% ± 11%	Explore
endothelial cell of artery	16 studies	73% ± 21%	Explore
capillary endothelial cell	16 studies	69% ± 21%	Explore
ciliated cell	15 studies	82% ± 12%	Explore
CD16-negative, CD56-bright natural killer cell, human	15 studies	89% ± 16%	Explore
CD16-positive, CD56-dim natural killer cell, human	15 studies	90% ± 9%	Explore
vein endothelial cell	15 studies	76% ± 23%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	14 studies	93% ± 22%	Explore
astrocyte	14 studies	38% ± 18%	Explore
myofibroblast cell	14 studies	89% ± 20%	Explore
myeloid cell	14 studies	81% ± 23%	Explore
goblet cell	13 studies	73% ± 27%	Explore
effector memory CD8-positive, alpha-beta T cell	12 studies	87% ± 20%	Explore
innate lymphoid cell	12 studies	93% ± 7%	Explore
plasmablast	12 studies	92% ± 7%	Explore
CD8-positive, alpha-beta memory T cell	12 studies	94% ± 11%	Explore
secretory cell	12 studies	86% ± 22%	Explore
mesothelial cell	12 studies	83% ± 21%	Explore
endothelial cell of vascular tree	12 studies	83% ± 27%	Explore
CD4-positive, alpha-beta memory T cell	11 studies	92% ± 10%	Explore
erythrocyte	11 studies	65% ± 26%	Explore
leukocyte	11 studies	78% ± 26%	Explore
T follicular helper cell	10 studies	96% ± 4%	Explore
neutrophil	10 studies	67% ± 17%	Explore
progenitor cell	10 studies	89% ± 18%	Explore
microglial cell	10 studies	60% ± 29%	Explore
type I pneumocyte	9 studies	70% ± 23%	Explore
type II pneumocyte	9 studies	81% ± 24%	Explore
IgG plasma cell	9 studies	83% ± 18%	Explore
hematopoietic stem cell	9 studies	89% ± 25%	Explore
club cell	8 studies	87% ± 18%	Explore
abnormal cell	8 studies	81% ± 24%	Explore
neuron	8 studies	63% ± 28%	Explore
enterocyte	8 studies	72% ± 23%	Explore
enteroendocrine cell	8 studies	76% ± 30%	Explore
IgA plasma cell	8 studies	79% ± 22%	Explore
respiratory goblet cell	7 studies	72% ± 25%	Explore
platelet	7 studies	51% ± 28%	Explore
mononuclear phagocyte	7 studies	83% ± 24%	Explore
epithelial cell of proximal tubule	7 studies	76% ± 24%	Explore
oligodendrocyte precursor cell	7 studies	43% ± 27%	Explore
transit amplifying cell	7 studies	76% ± 28%	Explore
retinal rod cell	7 studies	46% ± 23%	Explore
alveolar macrophage	6 studies	78% ± 25%	Explore
glutamatergic neuron	6 studies	31% ± 12%	Explore
kidney loop of Henle epithelial cell	6 studies	82% ± 12%	Explore
renal alpha-intercalated cell	6 studies	96% ± 3%	Explore
oligodendrocyte	6 studies	27% ± 8%	Explore
intestinal crypt stem cell	6 studies	73% ± 36%	Explore
amacrine cell	6 studies	47% ± 25%	Explore
retinal ganglion cell	6 studies	55% ± 28%	Explore
precursor B cell	6 studies	96% ± 4%	Explore
brush cell	6 studies	85% ± 15%	Explore
glial cell	6 studies	67% ± 26%	Explore
immature B cell	6 studies	97% ± 3%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	96% ± 6%	Explore
CD4-positive helper T cell	5 studies	95% ± 4%	Explore
central memory CD8-positive, alpha-beta T cell	5 studies	96% ± 6%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	91% ± 5%	Explore
hematopoietic precursor cell	5 studies	92% ± 11%	Explore
ionocyte	5 studies	87% ± 7%	Explore
kidney distal convoluted tubule epithelial cell	5 studies	92% ± 7%	Explore
megakaryocyte	5 studies	74% ± 20%	Explore
erythroblast	5 studies	83% ± 12%	Explore
OFF-bipolar cell	5 studies	59% ± 28%	Explore
ON-bipolar cell	5 studies	56% ± 27%	Explore
retinal cone cell	5 studies	56% ± 26%	Explore
lymphocyte	5 studies	83% ± 30%	Explore
T-helper 17 cell	5 studies	99% ± 1%	Explore
group 3 innate lymphoid cell	5 studies	94% ± 2%	Explore
Mueller cell	5 studies	57% ± 23%	Explore
double negative thymocyte	5 studies	97% ± 3%	Explore
effector CD4-positive, alpha-beta T cell	5 studies	95% ± 7%	Explore
effector CD8-positive, alpha-beta T cell	5 studies	98% ± 1%	Explore
granulocyte	5 studies	91% ± 10%	Explore
GABAergic neuron	5 studies	29% ± 8%	Explore
intermediate monocyte	5 studies	83% ± 13%	Explore
melanocyte	5 studies	71% ± 29%	Explore
CD4-positive, alpha-beta cytotoxic T cell	4 studies	83% ± 19%	Explore
duct epithelial cell	4 studies	94% ± 3%	Explore
exhausted T cell	4 studies	94% ± 4%	Explore
precursor cell	4 studies	81% ± 28%	Explore
pancreatic A cell	4 studies	95% ± 7%	Explore
type B pancreatic cell	4 studies	90% ± 11%	Explore
glomerular endothelial cell	4 studies	79% ± 15%	Explore
kidney connecting tubule epithelial cell	4 studies	88% ± 9%	Explore
podocyte	4 studies	86% ± 16%	Explore
GABAergic amacrine cell	4 studies	47% ± 20%	Explore
glycinergic amacrine cell	4 studies	46% ± 20%	Explore
pro-B cell	4 studies	97% ± 2%	Explore
neuroendocrine cell	4 studies	95% ± 2%	Explore
adventitial cell	4 studies	86% ± 14%	Explore
mucus secreting cell	4 studies	79% ± 32%	Explore
retina horizontal cell	4 studies	50% ± 17%	Explore
acinar cell	4 studies	87% ± 12%	Explore
muscle cell	4 studies	57% ± 22%	Explore
germinal center B cell	4 studies	98% ± 1%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	96% ± 6%	Explore
hepatocyte	4 studies	59% ± 35%	Explore
IgM plasma cell	4 studies	87% ± 12%	Explore
interneuron	4 studies	51% ± 26%	Explore
T-helper 1 cell	4 studies	99% ± 1%	Explore
deuterosomal cell	3 studies	86% ± 1%	Explore
pancreatic D cell	3 studies	97% ± 4%	Explore
renal beta-intercalated cell	3 studies	99% ± 0%	Explore
neural crest cell	3 studies	99% ± 0%	Explore
paneth cell	3 studies	92% ± 9%	Explore
retinal bipolar neuron	3 studies	50% ± 31%	Explore
renal principal cell	3 studies	83% ± 7%	Explore
thymocyte	3 studies	100% ± 0%	Explore
extravillous trophoblast	3 studies	99% ± 1%	Explore
placental villous trophoblast	3 studies	100% ± 0%	Explore
Schwann cell	3 studies	68% ± 37%	Explore
serous secreting cell	3 studies	87% ± 11%	Explore
tissue-resident macrophage	3 studies	66% ± 28%	Explore
follicular B cell	3 studies	99% ± 1%	Explore
intraepithelial lymphocyte	3 studies	97% ± 1%	Explore
rod bipolar cell	3 studies	65% ± 17%	Explore
endothelial cell of sinusoid	3 studies	53% ± 31%	Explore
myoepithelial cell	3 studies	98% ± 2%	Explore
cholangiocyte	3 studies	48% ± 36%	Explore
inflammatory macrophage	3 studies	83% ± 17%	Explore
luminal cell of prostate epithelium	3 studies	100% ± 0%	Explore
retinal pigment epithelial cell	3 studies	44% ± 20%	Explore
pancreatic ductal cell	3 studies	90% ± 7%	Explore
granulocyte monocyte progenitor cell	3 studies	78% ± 29%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	100% ± 0%	Explore
keratinocyte	3 studies	96% ± 4%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	98% ± 2%	Explore
double-positive, alpha-beta thymocyte	3 studies	97% ± 1%	Explore
progenitor cell of mammary luminal epithelium	3 studies	98% ± 2%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	19 studies	79% ± 21%	Explore
peripheral blood	18 studies	90% ± 11%	Explore
intestine	14 studies	81% ± 23%	Explore
brain	12 studies	39% ± 22%	Explore
eye	10 studies	57% ± 23%	Explore
kidney	8 studies	77% ± 22%	Explore
liver	7 studies	62% ± 28%	Explore
bone marrow	6 studies	84% ± 17%	Explore
pancreas	5 studies	85% ± 18%	Explore
uterus	5 studies	90% ± 13%	Explore
lymph node	4 studies	98% ± 2%	Explore
placenta	4 studies	85% ± 23%	Explore
heart	4 studies	45% ± 22%	Explore
adipose	4 studies	40% ± 31%	Explore
esophagus	4 studies	69% ± 27%	Explore
prostate	4 studies	92% ± 14%	Explore
breast	4 studies	94% ± 4%	Explore
skin	3 studies	75% ± 29%	Explore
stomach	3 studies	60% ± 26%	Explore
thymus	3 studies	75% ± 34%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	13280.85	1445 / 1445	100%	426.37	183 / 183
ovary	100%	34123.24	180 / 180	100%	1192.02	430 / 430
prostate	100%	14437.02	245 / 245	100%	332.65	502 / 502
pancreas	100%	10474.16	327 / 328	100%	218.27	178 / 178
stomach	100%	11384.23	359 / 359	100%	515.19	285 / 286
intestine	100%	14529.20	966 / 966	100%	371.45	525 / 527
skin	100%	20991.38	1809 / 1809	100%	218.86	470 / 472
uterus	100%	18263.88	170 / 170	100%	227.11	457 / 459
thymus	100%	12763.35	653 / 653	99%	237.72	601 / 605
breast	100%	16835.00	459 / 459	99%	257.21	1110 / 1118
bladder	100%	16043.05	21 / 21	99%	284.68	499 / 504
lung	100%	12084.27	576 / 578	99%	242.24	1144 / 1155
brain	100%	7579.21	2631 / 2642	99%	172.69	698 / 705
kidney	100%	10653.26	89 / 89	93%	179.20	835 / 901
adrenal gland	100%	11378.07	258 / 258	86%	142.38	198 / 230
liver	94%	4857.32	212 / 226	91%	151.46	370 / 406
adipose	100%	15373.27	1204 / 1204	0%	0	0 / 0
blood vessel	100%	15183.71	1335 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	100%	543.11	80 / 80
lymph node	0%	0	0 / 0	100%	549.98	29 / 29
spleen	100%	16593.95	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	180.90	45 / 45
ureter	0%	0	0 / 0	100%	173.55	1 / 1
muscle	100%	12312.87	801 / 803	0%	0	0 / 0
peripheral blood	97%	16834.92	903 / 929	0%	0	0 / 0
heart	97%	8128.95	833 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0006412	Biological process	translation
GO_0000027	Biological process	ribosomal large subunit assembly
GO_0002181	Biological process	cytoplasmic translation
GO_0005730	Cellular component	nucleolus
GO_0022626	Cellular component	cytosolic ribosome
GO_0070062	Cellular component	extracellular exosome
GO_0005829	Cellular component	cytosol
GO_0022625	Cellular component	cytosolic large ribosomal subunit
GO_0005737	Cellular component	cytoplasm
GO_0005634	Cellular component	nucleus
GO_0045296	Molecular function	cadherin binding
GO_0003735	Molecular function	structural constituent of ribosome
GO_0019843	Molecular function	rRNA binding
GO_0005515	Molecular function	protein binding
GO_1904841	Molecular function	TORC2 complex binding
GO_0003723	Molecular function	RNA binding

Gene name	RPL23A
Protein name	Large ribosomal subunit protein uL23 (60S ribosomal protein L23a) Ribosomal protein L23a
Synonyms	hCG_1988529
Description	FUNCTION: Component of the large ribosomal subunit . The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell . Binds a specific region on the 26S rRNA . May promote p53/TP53 degradation possibly through the stimulation of MDM2-mediated TP53 polyubiquitination . .
Accessions	ENST00000355731.8 K7ERT8 ENST00000496182.5 P62750 H7BY10 ENST00000394935.7 ENST00000394938.8 ENST00000578181.1 ENST00000422514.7 K7EJV9 K7EMA7 A8MUS3 ENST00000472628.1

RPL23A report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review