Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 15 studies | 44% ± 15% | |
endothelial cell | 12 studies | 26% ± 8% | |
microglial cell | 10 studies | 27% ± 8% | |
glutamatergic neuron | 9 studies | 44% ± 23% | |
oligodendrocyte precursor cell | 8 studies | 28% ± 12% | |
astrocyte | 7 studies | 31% ± 10% | |
T cell | 6 studies | 20% ± 3% | |
dendritic cell | 6 studies | 20% ± 3% | |
fibroblast | 6 studies | 22% ± 6% | |
macrophage | 6 studies | 40% ± 9% | |
neuron | 5 studies | 42% ± 19% | |
GABAergic neuron | 5 studies | 43% ± 15% | |
interneuron | 5 studies | 34% ± 20% | |
retina horizontal cell | 4 studies | 24% ± 5% | |
epithelial cell | 4 studies | 29% ± 12% | |
myeloid cell | 4 studies | 26% ± 6% | |
endothelial cell of lymphatic vessel | 4 studies | 22% ± 4% | |
type I pneumocyte | 4 studies | 21% ± 5% | |
smooth muscle cell | 4 studies | 21% ± 3% | |
mononuclear phagocyte | 3 studies | 20% ± 6% | |
Mueller cell | 3 studies | 21% ± 3% | |
B cell | 3 studies | 21% ± 4% | |
alveolar macrophage | 3 studies | 26% ± 6% | |
ciliated cell | 3 studies | 23% ± 6% | |
monocyte | 3 studies | 29% ± 2% | |
type II pneumocyte | 3 studies | 19% ± 3% | |
lymphocyte | 3 studies | 28% ± 8% | |
basal cell | 3 studies | 30% ± 13% | |
adipocyte | 3 studies | 23% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 15 studies | 36% ± 19% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2364.71 | 1445 / 1445 | 100% | 23.03 | 183 / 183 |
ovary | 100% | 2055.94 | 180 / 180 | 100% | 26.57 | 430 / 430 |
prostate | 100% | 1831.56 | 245 / 245 | 100% | 29.91 | 502 / 502 |
brain | 100% | 2368.49 | 2641 / 2642 | 100% | 29.51 | 705 / 705 |
breast | 100% | 1729.42 | 459 / 459 | 100% | 24.36 | 1117 / 1118 |
lung | 100% | 1827.30 | 577 / 578 | 100% | 24.25 | 1155 / 1155 |
thymus | 100% | 3267.00 | 653 / 653 | 100% | 54.98 | 603 / 605 |
uterus | 100% | 2888.97 | 170 / 170 | 100% | 24.08 | 457 / 459 |
bladder | 100% | 2154.05 | 21 / 21 | 99% | 22.08 | 501 / 504 |
kidney | 100% | 2579.90 | 89 / 89 | 98% | 30.16 | 886 / 901 |
intestine | 100% | 1850.73 | 966 / 966 | 98% | 17.35 | 518 / 527 |
pancreas | 99% | 843.47 | 326 / 328 | 99% | 23.41 | 176 / 178 |
stomach | 100% | 1483.45 | 359 / 359 | 98% | 17.09 | 281 / 286 |
skin | 100% | 1819.00 | 1808 / 1809 | 97% | 25.99 | 456 / 472 |
adrenal gland | 100% | 1820.19 | 258 / 258 | 95% | 17.57 | 218 / 230 |
liver | 99% | 945.73 | 223 / 226 | 93% | 13.51 | 378 / 406 |
adipose | 100% | 1933.19 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2260.81 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 25.61 | 29 / 29 |
spleen | 100% | 2341.99 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 18.96 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.14 | 1 / 1 |
peripheral blood | 95% | 1728.05 | 887 / 929 | 0% | 0 | 0 / 0 |
heart | 95% | 867.96 | 821 / 861 | 0% | 0 | 0 / 0 |
muscle | 94% | 649.69 | 752 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 85% | 14.71 | 68 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016020 | Cellular component | membrane |
GO_0005769 | Cellular component | early endosome |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | PPP1R21 |
Protein name | Protein phosphatase 1 regulatory subunit 21 (Coiled-coil domain-containing protein 128) (KLRAQ motif-containing protein 1) Protein phosphatase 1 regulatory subunit 21 |
Synonyms | KLRAQ1 CCDC128 |
Description | FUNCTION: Putative regulator of protein phosphatase 1 (PP1) activity . May play a role in the endosomal sorting process or in endosome maturation pathway . . |
Accessions | H7C1Y1 F8WE40 ENST00000416913.5 Q6ZMI0 ENST00000281394.8 [Q6ZMI0-2] ENST00000449090.6 [Q6ZMI0-5] ENST00000455978.1 F8W7E1 ENST00000294952.13 [Q6ZMI0-1] ENST00000421486.1 ENST00000431614.5 F8WBY8 |