Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 14 studies | 23% ± 6% | |
peripheral blood | 14 studies | 30% ± 10% | |
intestine | 8 studies | 22% ± 8% | |
brain | 7 studies | 27% ± 6% | |
lymph node | 5 studies | 26% ± 3% | |
bone marrow | 4 studies | 32% ± 18% | |
eye | 4 studies | 26% ± 5% | |
liver | 4 studies | 30% ± 13% | |
kidney | 3 studies | 25% ± 2% | |
uterus | 3 studies | 26% ± 9% | |
breast | 3 studies | 17% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 12199.39 | 459 / 459 | 100% | 140.39 | 1118 / 1118 |
esophagus | 100% | 11987.82 | 1445 / 1445 | 100% | 148.17 | 183 / 183 |
intestine | 100% | 12631.81 | 966 / 966 | 100% | 127.23 | 527 / 527 |
prostate | 100% | 9834.79 | 245 / 245 | 100% | 105.33 | 502 / 502 |
skin | 100% | 14401.54 | 1809 / 1809 | 100% | 144.73 | 472 / 472 |
stomach | 100% | 9065.68 | 359 / 359 | 100% | 131.83 | 286 / 286 |
uterus | 100% | 13899.59 | 170 / 170 | 100% | 141.17 | 459 / 459 |
thymus | 100% | 11268.09 | 653 / 653 | 100% | 123.79 | 604 / 605 |
brain | 100% | 6733.41 | 2636 / 2642 | 100% | 124.53 | 705 / 705 |
ovary | 100% | 15031.43 | 180 / 180 | 100% | 146.50 | 429 / 430 |
lung | 100% | 11553.35 | 578 / 578 | 100% | 131.62 | 1152 / 1155 |
bladder | 100% | 12101.90 | 21 / 21 | 100% | 123.38 | 502 / 504 |
pancreas | 100% | 6050.42 | 327 / 328 | 99% | 96.76 | 177 / 178 |
kidney | 100% | 6920.55 | 89 / 89 | 98% | 80.32 | 887 / 901 |
adrenal gland | 100% | 9574.26 | 258 / 258 | 98% | 68.15 | 225 / 230 |
liver | 100% | 4014.46 | 225 / 226 | 96% | 59.35 | 390 / 406 |
adipose | 100% | 12316.63 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 12710.56 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 126.50 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 118.49 | 29 / 29 |
muscle | 100% | 7962.11 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 10954.44 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 160.54 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 51.94 | 1 / 1 |
heart | 99% | 6805.82 | 851 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 12222.29 | 918 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0009615 | Biological process | response to virus |
GO_0006396 | Biological process | RNA processing |
GO_0000380 | Biological process | alternative mRNA splicing, via spliceosome |
GO_0005634 | Cellular component | nucleus |
GO_0005654 | Cellular component | nucleoplasm |
GO_1990904 | Cellular component | ribonucleoprotein complex |
GO_0045202 | Cellular component | synapse |
GO_0019899 | Molecular function | enzyme binding |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | HNRNPUL1 |
Protein name | Alternative protein HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U like 1 Heterogeneous nuclear ribonucleoprotein U like 1 (cDNA FLJ56481, highly similar to Heterogeneous nuclear ribonucleoprotein U-like protein 1) Heterogeneous nuclear ribonucleoprotein U-like protein 1 (Adenovirus early region 1B-associated protein 5) (E1B-55 kDa-associated protein 5) (E1B-AP5) |
Synonyms | HNRPUL1 E1BAP5 |
Description | FUNCTION: Acts as a basic transcriptional regulator. Represses basic transcription driven by several virus and cellular promoters. When associated with BRD7, activates transcription of glucocorticoid-responsive promoter in the absence of ligand-stimulation. Also plays a role in mRNA processing and transport. Binds avidly to poly(G) and poly(C) RNA homopolymers in vitro. . |
Accessions | Q9BUJ2 ENST00000600332.1 ENST00000263367.7 ENST00000599719.5 ENST00000602130.5 [Q9BUJ2-2] ENST00000597725.5 M0R203 ENST00000601336.5 M0QYG9 ENST00000595336.1 M0QYI8 M0QYM5 ENST00000601309.5 ENST00000595196.5 ENST00000599614.5 ENST00000392006.8 [Q9BUJ2-1] ENST00000595018.5 [Q9BUJ2-4] B7Z4B8 A0A087X1I2 ENST00000593587.5 [Q9BUJ2-4] M0QZV6 M0R3F1 ENST00000378215.8 [Q9BUJ2-3] M0QYZ0 ENST00000617774.1 ENST00000352456.7 A0A0A0MRA5 ENST00000600596.1 M0R0K8 M0R247 L0R5B4 |