H1-2 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
B cell	18 studies	28% ± 12%	Explore
natural killer cell	18 studies	28% ± 11%	Explore
plasma cell	16 studies	37% ± 15%	Explore
ciliated cell	16 studies	32% ± 13%	Explore
epithelial cell	15 studies	36% ± 17%	Explore
CD4-positive, alpha-beta T cell	15 studies	27% ± 8%	Explore
CD8-positive, alpha-beta T cell	13 studies	25% ± 8%	Explore
regulatory T cell	12 studies	23% ± 7%	Explore
T cell	9 studies	32% ± 12%	Explore
plasmablast	9 studies	49% ± 20%	Explore
plasmacytoid dendritic cell	8 studies	31% ± 13%	Explore
platelet	8 studies	32% ± 9%	Explore
effector CD8-positive, alpha-beta T cell	8 studies	24% ± 11%	Explore
naive B cell	8 studies	26% ± 8%	Explore
CD16-negative, CD56-bright natural killer cell, human	8 studies	31% ± 9%	Explore
type I pneumocyte	7 studies	24% ± 6%	Explore
CD16-positive, CD56-dim natural killer cell, human	7 studies	29% ± 9%	Explore
conventional dendritic cell	7 studies	29% ± 21%	Explore
IgG plasma cell	7 studies	24% ± 8%	Explore
basal cell	7 studies	28% ± 7%	Explore
gamma-delta T cell	7 studies	34% ± 15%	Explore
macrophage	6 studies	22% ± 7%	Explore
classical monocyte	6 studies	31% ± 21%	Explore
IgA plasma cell	6 studies	25% ± 7%	Explore
abnormal cell	6 studies	33% ± 15%	Explore
erythrocyte	6 studies	34% ± 18%	Explore
CD8-positive, alpha-beta memory T cell	6 studies	30% ± 9%	Explore
monocyte	5 studies	34% ± 16%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	5 studies	20% ± 5%	Explore
hematopoietic stem cell	5 studies	35% ± 11%	Explore
precursor B cell	5 studies	65% ± 16%	Explore
secretory cell	5 studies	37% ± 11%	Explore
mucosal invariant T cell	5 studies	28% ± 6%	Explore
dendritic cell	4 studies	37% ± 5%	Explore
mast cell	4 studies	34% ± 11%	Explore
smooth muscle cell	4 studies	21% ± 6%	Explore
hematopoietic precursor cell	4 studies	32% ± 21%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	4 studies	21% ± 6%	Explore
effector memory CD8-positive, alpha-beta T cell	4 studies	30% ± 10%	Explore
non-classical monocyte	4 studies	29% ± 19%	Explore
epithelial cell of proximal tubule	4 studies	22% ± 4%	Explore
retinal rod cell	4 studies	21% ± 8%	Explore
pro-B cell	4 studies	50% ± 18%	Explore
club cell	4 studies	23% ± 5%	Explore
immature B cell	4 studies	49% ± 15%	Explore
effector CD4-positive, alpha-beta T cell	4 studies	26% ± 9%	Explore
goblet cell	4 studies	26% ± 12%	Explore
memory B cell	4 studies	22% ± 4%	Explore
endothelial cell	3 studies	25% ± 2%	Explore
fibroblast	3 studies	23% ± 2%	Explore
type II pneumocyte	3 studies	23% ± 4%	Explore
deuterosomal cell	3 studies	34% ± 5%	Explore
squamous epithelial cell	3 studies	56% ± 17%	Explore
pancreatic A cell	3 studies	29% ± 7%	Explore
leukocyte	3 studies	23% ± 6%	Explore
exhausted T cell	3 studies	31% ± 20%	Explore
mature NK T cell	3 studies	31% ± 10%	Explore
retinal bipolar neuron	3 studies	25% ± 6%	Explore
lymphocyte	3 studies	21% ± 4%	Explore
myeloid cell	3 studies	27% ± 5%	Explore
enterocyte	3 studies	25% ± 1%	Explore
retinal cone cell	3 studies	40% ± 7%	Explore
luminal cell of prostate epithelium	3 studies	48% ± 9%	Explore
effector memory CD4-positive, alpha-beta T cell	3 studies	23% ± 3%	Explore
pericyte	3 studies	17% ± 1%	Explore
group 3 innate lymphoid cell	3 studies	40% ± 10%	Explore
double negative thymocyte	3 studies	34% ± 19%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	11 studies	24% ± 12%	Explore
lymph node	5 studies	25% ± 4%	Explore
lung	4 studies	30% ± 3%	Explore
prostate	4 studies	27% ± 8%	Explore
pancreas	3 studies	33% ± 2%	Explore
eye	3 studies	22% ± 4%	Explore
kidney	3 studies	19% ± 4%	Explore
intestine	3 studies	23% ± 6%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	98%	3660.69	241 / 245	99%	873.16	497 / 502
liver	100%	1852.76	225 / 226	92%	547.48	372 / 406
thymus	99%	1703.65	647 / 653	87%	337.83	527 / 605
breast	97%	1298.52	446 / 459	84%	429.89	935 / 1118
kidney	100%	1889.85	89 / 89	73%	221.72	659 / 901
lung	99%	1540.55	571 / 578	70%	214.05	812 / 1155
ovary	94%	2108.63	170 / 180	74%	297.64	320 / 430
bladder	95%	763.43	20 / 21	71%	286.70	360 / 504
pancreas	78%	819.70	256 / 328	83%	244.65	147 / 178
uterus	68%	825.04	115 / 170	88%	418.52	402 / 459
esophagus	90%	1017.95	1300 / 1445	54%	142.05	99 / 183
skin	83%	973.43	1508 / 1809	57%	123.49	271 / 472
adrenal gland	98%	1192.52	253 / 258	37%	84.18	85 / 230
stomach	97%	1379.48	348 / 359	31%	76.43	89 / 286
intestine	90%	1100.99	867 / 966	35%	84.07	187 / 527
muscle	100%	3491.76	803 / 803	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	300.56	1 / 1
peripheral blood	99%	5345.15	924 / 929	0%	0	0 / 0
spleen	98%	1427.02	235 / 241	0%	0	0 / 0
adipose	97%	1405.76	1171 / 1204	0%	0	0 / 0
heart	97%	1902.75	834 / 861	0%	0	0 / 0
blood vessel	96%	1397.71	1280 / 1335	0%	0	0 / 0
tonsil	0%	0	0 / 0	87%	329.22	39 / 45
brain	53%	342.84	1390 / 2642	27%	46.33	191 / 705
lymph node	0%	0	0 / 0	66%	310.38	19 / 29
eye	0%	0	0 / 0	36%	72.66	29 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0