Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 14 studies | 49% ± 15% | |
astrocyte | 12 studies | 28% ± 12% | |
endothelial cell | 11 studies | 24% ± 8% | |
oligodendrocyte precursor cell | 9 studies | 33% ± 12% | |
GABAergic neuron | 6 studies | 45% ± 16% | |
neuron | 5 studies | 27% ± 17% | |
glutamatergic neuron | 5 studies | 45% ± 21% | |
macrophage | 5 studies | 24% ± 5% | |
microglial cell | 4 studies | 23% ± 4% | |
epithelial cell | 4 studies | 35% ± 17% | |
endothelial cell of lymphatic vessel | 4 studies | 23% ± 7% | |
adipocyte | 4 studies | 19% ± 2% | |
GABAergic interneuron | 3 studies | 23% ± 2% | |
retinal pigment epithelial cell | 3 studies | 31% ± 4% | |
ependymal cell | 3 studies | 32% ± 14% | |
type I pneumocyte | 3 studies | 24% ± 5% | |
melanocyte | 3 studies | 61% ± 25% | |
interneuron | 3 studies | 48% ± 16% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 10 studies | 41% ± 19% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 100% | 2153.38 | 89 / 89 | 99% | 33.49 | 891 / 901 |
skin | 100% | 4988.22 | 1809 / 1809 | 99% | 38.84 | 466 / 472 |
brain | 100% | 2735.68 | 2638 / 2642 | 98% | 15.61 | 691 / 705 |
esophagus | 100% | 2842.82 | 1443 / 1445 | 95% | 15.00 | 174 / 183 |
breast | 100% | 2416.81 | 459 / 459 | 93% | 21.93 | 1044 / 1118 |
prostate | 99% | 1610.30 | 243 / 245 | 92% | 10.78 | 462 / 502 |
lung | 99% | 1973.37 | 574 / 578 | 91% | 9.68 | 1046 / 1155 |
stomach | 100% | 2364.24 | 359 / 359 | 86% | 8.54 | 247 / 286 |
thymus | 100% | 1480.02 | 650 / 653 | 87% | 8.02 | 524 / 605 |
adrenal gland | 100% | 1183.78 | 257 / 258 | 86% | 10.15 | 198 / 230 |
intestine | 100% | 2521.82 | 964 / 966 | 81% | 7.21 | 429 / 527 |
liver | 99% | 1488.53 | 223 / 226 | 76% | 8.18 | 308 / 406 |
ovary | 100% | 1518.64 | 180 / 180 | 73% | 5.88 | 313 / 430 |
uterus | 100% | 1832.89 | 170 / 170 | 70% | 6.41 | 321 / 459 |
pancreas | 78% | 634.08 | 257 / 328 | 90% | 8.59 | 160 / 178 |
bladder | 100% | 2263.52 | 21 / 21 | 62% | 5.20 | 313 / 504 |
blood vessel | 100% | 3058.60 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 60.40 | 80 / 80 |
adipose | 100% | 2253.68 | 1202 / 1204 | 0% | 0 | 0 / 0 |
spleen | 98% | 1139.30 | 235 / 241 | 0% | 0 | 0 / 0 |
muscle | 95% | 1039.51 | 760 / 803 | 0% | 0 | 0 / 0 |
heart | 89% | 964.51 | 763 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 78% | 7.49 | 35 / 45 |
peripheral blood | 62% | 753.31 | 579 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 34% | 2.65 | 10 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0032869 | Biological process | cellular response to insulin stimulus |
GO_0006412 | Biological process | translation |
GO_2000766 | Biological process | negative regulation of cytoplasmic translation |
GO_1900248 | Biological process | negative regulation of cytoplasmic translational elongation |
GO_0071456 | Biological process | cellular response to hypoxia |
GO_0005634 | Cellular component | nucleus |
GO_0043005 | Cellular component | neuron projection |
GO_0045202 | Cellular component | synapse |
GO_0005737 | Cellular component | cytoplasm |
GO_1990124 | Cellular component | messenger ribonucleoprotein complex |
GO_0008135 | Molecular function | translation factor activity, RNA binding |
GO_0043022 | Molecular function | ribosome binding |
GO_0005095 | Molecular function | GTPase inhibitor activity |
GO_0000900 | Molecular function | mRNA regulatory element binding translation repressor activity |
GO_0043024 | Molecular function | ribosomal small subunit binding |
GO_0035925 | Molecular function | mRNA 3'-UTR AU-rich region binding |
GO_0003723 | Molecular function | RNA binding |
GO_0043023 | Molecular function | ribosomal large subunit binding |
GO_0003730 | Molecular function | mRNA 3'-UTR binding |
Gene name | CPEB2 |
Protein name | Cytoplasmic polyadenylation element binding protein 2 Cytoplasmic polyadenylation element-binding protein 2 (CPE-BP2) (CPE-binding protein 2) (hCPEB-2) |
Synonyms | |
Description | FUNCTION: May play a role in translational regulation of stored mRNAs in transcriptionally inactive haploid spermatids. Binds to poly(U) RNA oligomers (By similarity). Required for cell cycle progression, specifically for the transition from metaphase to anaphase . . |
Accessions | ENST00000382401.8 ENST00000509684.1 A0A5K1VW79 A0A5K1VW93 A0A5K1VW71 H0Y9D9 Q7Z5Q1 A0A5K1VW61 ENST00000345451.8 ENST00000507071.6 ENST00000442003.6 [Q7Z5Q1-8] ENST00000382395.8 ENST00000538197.7 [Q7Z5Q1-9] |