Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 20 studies | 44% ± 15% | |
lung | 18 studies | 52% ± 17% | |
intestine | 13 studies | 39% ± 20% | |
brain | 10 studies | 31% ± 9% | |
kidney | 9 studies | 51% ± 15% | |
eye | 9 studies | 47% ± 19% | |
lymph node | 6 studies | 50% ± 21% | |
liver | 6 studies | 46% ± 20% | |
pancreas | 5 studies | 63% ± 25% | |
bone marrow | 5 studies | 35% ± 13% | |
placenta | 4 studies | 56% ± 24% | |
uterus | 4 studies | 67% ± 11% | |
prostate | 4 studies | 44% ± 12% | |
breast | 4 studies | 57% ± 5% | |
adrenal gland | 3 studies | 50% ± 14% | |
esophagus | 3 studies | 49% ± 29% | |
skin | 3 studies | 32% ± 7% | |
thymus | 3 studies | 64% ± 26% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 8065.72 | 180 / 180 | 100% | 182.47 | 430 / 430 |
prostate | 100% | 9014.96 | 245 / 245 | 100% | 386.81 | 502 / 502 |
uterus | 100% | 7482.49 | 170 / 170 | 100% | 276.59 | 459 / 459 |
kidney | 100% | 9398.45 | 89 / 89 | 100% | 205.73 | 900 / 901 |
brain | 100% | 10572.45 | 2642 / 2642 | 100% | 319.87 | 704 / 705 |
thymus | 100% | 9296.88 | 653 / 653 | 100% | 338.60 | 604 / 605 |
skin | 100% | 6819.76 | 1806 / 1809 | 100% | 306.57 | 472 / 472 |
intestine | 100% | 7628.64 | 966 / 966 | 100% | 217.64 | 525 / 527 |
adrenal gland | 100% | 12884.81 | 258 / 258 | 100% | 249.51 | 229 / 230 |
breast | 100% | 8642.92 | 459 / 459 | 99% | 293.91 | 1112 / 1118 |
pancreas | 100% | 5063.26 | 328 / 328 | 99% | 211.76 | 177 / 178 |
esophagus | 100% | 7356.72 | 1443 / 1445 | 99% | 123.03 | 182 / 183 |
lung | 100% | 6701.66 | 576 / 578 | 100% | 212.77 | 1151 / 1155 |
stomach | 100% | 6676.73 | 359 / 359 | 99% | 184.14 | 283 / 286 |
bladder | 100% | 7971.76 | 21 / 21 | 99% | 245.39 | 498 / 504 |
liver | 100% | 6399.82 | 225 / 226 | 99% | 211.44 | 402 / 406 |
adipose | 100% | 8497.67 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 383.98 | 29 / 29 |
muscle | 100% | 13024.60 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 6582.71 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 231.99 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 247.00 | 1 / 1 |
blood vessel | 100% | 9734.12 | 1334 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 264.92 | 79 / 80 |
heart | 98% | 8572.00 | 842 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 93% | 5613.97 | 865 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_2000679 | Biological process | positive regulation of transcription regulatory region DNA binding |
GO_0036530 | Biological process | protein deglycation, methylglyoxal removal |
GO_0006281 | Biological process | DNA repair |
GO_0006954 | Biological process | inflammatory response |
GO_1903377 | Biological process | negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway |
GO_0046295 | Biological process | glycolate biosynthetic process |
GO_2000157 | Biological process | negative regulation of ubiquitin-specific protease activity |
GO_0106045 | Biological process | guanine deglycation, methylglyoxal removal |
GO_1903197 | Biological process | positive regulation of L-dopa biosynthetic process |
GO_0036529 | Biological process | protein deglycation, glyoxal removal |
GO_0031334 | Biological process | positive regulation of protein-containing complex assembly |
GO_1903751 | Biological process | negative regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide |
GO_0001933 | Biological process | negative regulation of protein phosphorylation |
GO_2000379 | Biological process | positive regulation of reactive oxygen species metabolic process |
GO_0050821 | Biological process | protein stabilization |
GO_0106044 | Biological process | guanine deglycation |
GO_0110095 | Biological process | cellular detoxification of aldehyde |
GO_0030073 | Biological process | insulin secretion |
GO_1903384 | Biological process | negative regulation of hydrogen peroxide-induced neuron intrinsic apoptotic signaling pathway |
GO_0051897 | Biological process | positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction |
GO_0006914 | Biological process | autophagy |
GO_0032091 | Biological process | negative regulation of protein binding |
GO_0006979 | Biological process | response to oxidative stress |
GO_0070301 | Biological process | cellular response to hydrogen peroxide |
GO_1903122 | Biological process | negative regulation of TRAIL-activated apoptotic signaling pathway |
GO_0042743 | Biological process | hydrogen peroxide metabolic process |
GO_1903376 | Biological process | regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway |
GO_0032435 | Biological process | negative regulation of proteasomal ubiquitin-dependent protein catabolic process |
GO_0098869 | Biological process | cellular oxidant detoxification |
GO_1902236 | Biological process | negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway |
GO_0010629 | Biological process | negative regulation of gene expression |
GO_0010628 | Biological process | positive regulation of gene expression |
GO_1903428 | Biological process | positive regulation of reactive oxygen species biosynthetic process |
GO_0002866 | Biological process | positive regulation of acute inflammatory response to antigenic stimulus |
GO_0050727 | Biological process | regulation of inflammatory response |
GO_0043523 | Biological process | regulation of neuron apoptotic process |
GO_1903427 | Biological process | negative regulation of reactive oxygen species biosynthetic process |
GO_0070994 | Biological process | detection of oxidative stress |
GO_0060081 | Biological process | membrane hyperpolarization |
GO_1903178 | Biological process | positive regulation of tyrosine 3-monooxygenase activity |
GO_0050787 | Biological process | detoxification of mercury ion |
GO_0032757 | Biological process | positive regulation of interleukin-8 production |
GO_0060765 | Biological process | regulation of androgen receptor signaling pathway |
GO_0006517 | Biological process | protein deglycosylation |
GO_1903200 | Biological process | positive regulation of L-dopa decarboxylase activity |
GO_1902958 | Biological process | positive regulation of mitochondrial electron transport, NADH to ubiquinone |
GO_1903189 | Biological process | glyoxal metabolic process |
GO_0009438 | Biological process | methylglyoxal metabolic process |
GO_1905259 | Biological process | negative regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway |
GO_0007265 | Biological process | Ras protein signal transduction |
GO_0046826 | Biological process | negative regulation of protein export from nucleus |
GO_0006469 | Biological process | negative regulation of protein kinase activity |
GO_0051899 | Biological process | membrane depolarization |
GO_0032148 | Biological process | activation of protein kinase B activity |
GO_0051091 | Biological process | positive regulation of DNA-binding transcription factor activity |
GO_1902903 | Biological process | regulation of supramolecular fiber organization |
GO_0033138 | Biological process | positive regulation of peptidyl-serine phosphorylation |
GO_1903073 | Biological process | negative regulation of death-inducing signaling complex assembly |
GO_0036526 | Biological process | peptidyl-cysteine deglycation |
GO_0061691 | Biological process | detoxification of hydrogen peroxide |
GO_0034599 | Biological process | cellular response to oxidative stress |
GO_0007005 | Biological process | mitochondrion organization |
GO_0033864 | Biological process | positive regulation of NAD(P)H oxidase activity |
GO_0061727 | Biological process | methylglyoxal catabolic process to lactate |
GO_0006508 | Biological process | proteolysis |
GO_0036471 | Biological process | cellular response to glyoxal |
GO_1902177 | Biological process | positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway |
GO_0036527 | Biological process | peptidyl-arginine deglycation |
GO_0007338 | Biological process | single fertilization |
GO_0051444 | Biological process | negative regulation of ubiquitin-protein transferase activity |
GO_0043524 | Biological process | negative regulation of neuron apoptotic process |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_1903599 | Biological process | positive regulation of autophagy of mitochondrion |
GO_2001268 | Biological process | negative regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway |
GO_0106046 | Biological process | guanine deglycation, glyoxal removal |
GO_0008344 | Biological process | adult locomotory behavior |
GO_0051583 | Biological process | dopamine uptake involved in synaptic transmission |
GO_1902176 | Biological process | negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway |
GO_1903181 | Biological process | positive regulation of dopamine biosynthetic process |
GO_0140041 | Biological process | cellular detoxification of methylglyoxal |
GO_0010273 | Biological process | detoxification of copper ion |
GO_0036528 | Biological process | peptidyl-lysine deglycation |
GO_0033234 | Biological process | negative regulation of protein sumoylation |
GO_0051881 | Biological process | regulation of mitochondrial membrane potential |
GO_1903168 | Biological process | positive regulation of pyrroline-5-carboxylate reductase activity |
GO_1903190 | Biological process | glyoxal catabolic process |
GO_2000825 | Biological process | positive regulation of androgen receptor activity |
GO_1901671 | Biological process | positive regulation of superoxide dismutase activity |
GO_2001237 | Biological process | negative regulation of extrinsic apoptotic signaling pathway |
GO_0019249 | Biological process | lactate biosynthetic process |
GO_0032679 | Biological process | regulation of TRAIL production |
GO_1903094 | Biological process | negative regulation of protein K48-linked deubiquitination |
GO_1901984 | Biological process | negative regulation of protein acetylation |
GO_0042593 | Biological process | glucose homeostasis |
GO_1900182 | Biological process | positive regulation of protein localization to nucleus |
GO_0031397 | Biological process | negative regulation of protein ubiquitination |
GO_0098793 | Cellular component | presynapse |
GO_0045121 | Cellular component | membrane raft |
GO_0016605 | Cellular component | PML body |
GO_0005634 | Cellular component | nucleus |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005912 | Cellular component | adherens junction |
GO_0005886 | Cellular component | plasma membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0005758 | Cellular component | mitochondrial intermembrane space |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005737 | Cellular component | cytoplasm |
GO_0030424 | Cellular component | axon |
GO_0000785 | Cellular component | chromatin |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0044297 | Cellular component | cell body |
GO_0140297 | Molecular function | DNA-binding transcription factor binding |
GO_0001046 | Molecular function | core promoter sequence-specific DNA binding |
GO_1990422 | Molecular function | glyoxalase (glycolic acid-forming) activity |
GO_0019955 | Molecular function | cytokine binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0097110 | Molecular function | scaffold protein binding |
GO_1990381 | Molecular function | ubiquitin-specific protease binding |
GO_1903135 | Molecular function | cupric ion binding |
GO_0044388 | Molecular function | small protein activating enzyme binding |
GO_0003690 | Molecular function | double-stranded DNA binding |
GO_0019900 | Molecular function | kinase binding |
GO_0019826 | Molecular function | oxygen sensor activity |
GO_0005102 | Molecular function | signaling receptor binding |
GO_0016532 | Molecular function | superoxide dismutase copper chaperone activity |
GO_0051920 | Molecular function | peroxiredoxin activity |
GO_0016684 | Molecular function | oxidoreductase activity, acting on peroxide as acceptor |
GO_0036524 | Molecular function | protein deglycase activity |
GO_0019899 | Molecular function | enzyme binding |
GO_0008233 | Molecular function | peptidase activity |
GO_0045340 | Molecular function | mercury ion binding |
GO_0003729 | Molecular function | mRNA binding |
GO_0050681 | Molecular function | nuclear androgen receptor binding |
GO_0044390 | Molecular function | ubiquitin-like protein conjugating enzyme binding |
GO_0005507 | Molecular function | copper ion binding |
GO_0005515 | Molecular function | protein binding |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0036470 | Molecular function | tyrosine 3-monooxygenase activator activity |
GO_0003697 | Molecular function | single-stranded DNA binding |
GO_0044877 | Molecular function | protein-containing complex binding |
GO_0045296 | Molecular function | cadherin binding |
GO_0036478 | Molecular function | L-dopa decarboxylase activator activity |
GO_1903136 | Molecular function | cuprous ion binding |
GO_0003713 | Molecular function | transcription coactivator activity |
Gene name | PARK7 |
Protein name | Parkinson disease protein 7 (Maillard deglycase) (Oncogene DJ1) (Parkinsonism-associated deglycase) (Protein DJ-1) (DJ-1) (Protein/nucleic acid deglycase DJ-1) (EC 3.1.2.-, EC 3.5.1.-, EC 3.5.1.124) protein deglycase (EC 3.5.1.124) (Maillard deglycase) (Parkinsonism-associated deglycase) (Protein DJ-1) (Protein/nucleic acid deglycase DJ-1) Parkinsonism associated deglycase |
Synonyms | |
Description | FUNCTION: Multifunctional protein with controversial molecular function which plays an important role in cell protection against oxidative stress and cell death acting as oxidative stress sensor and redox-sensitive chaperone and protease . It is involved in neuroprotective mechanisms like the stabilization of NFE2L2 and PINK1 proteins, male fertility as a positive regulator of androgen signaling pathway as well as cell growth and transformation through, for instance, the modulation of NF-kappa-B signaling pathway . Has been described as a protein and nucleotide deglycase that catalyzes the deglycation of the Maillard adducts formed between amino groups of proteins or nucleotides and reactive carbonyl groups of glyoxals . But this function is rebuted by other works . As a protein deglycase, repairs methylglyoxal- and glyoxal-glycated proteins, and releases repaired proteins and lactate or glycolate, respectively. Deglycates cysteine, arginine and lysine residues in proteins, and thus reactivates these proteins by reversing glycation by glyoxals. Acts on early glycation intermediates (hemithioacetals and aminocarbinols), preventing the formation of advanced glycation endproducts (AGE) that cause irreversible damage . Also functions as a nucleotide deglycase able to repair glycated guanine in the free nucleotide pool (GTP, GDP, GMP, dGTP) and in DNA and RNA. Is thus involved in a major nucleotide repair system named guanine glycation repair (GG repair), dedicated to reversing methylglyoxal and glyoxal damage via nucleotide sanitization and direct nucleic acid repair . Protects histones from adduction by methylglyoxal, controls the levels of methylglyoxal-derived argininine modifications on chromatin . Able to remove the glycations and restore histone 3, histone glycation disrupts both local and global chromatin architecture by altering histone-DNA interactions as well as histone acetylation and ubiquitination levels . Displays a very low glyoxalase activity that may reflect its deglycase activity . Eliminates hydrogen peroxide and protects cells against hydrogen peroxide-induced cell death . Required for correct mitochondrial morphology and function as well as for autophagy of dysfunctional mitochondria . Plays a role in regulating expression or stability of the mitochondrial uncoupling proteins SLC25A14 and SLC25A27 in dopaminergic neurons of the substantia nigra pars compacta and attenuates the oxidative stress induced by calcium entry into the neurons via L-type channels during pacemaking . Regulates astrocyte inflammatory responses, may modulate lipid rafts-dependent endocytosis in astrocytes and neuronal cells . In pancreatic islets, involved in the maintenance of mitochondrial reactive oxygen species (ROS) levels and glucose homeostasis in an age- and diet dependent manner. Protects pancreatic beta cells from cell death induced by inflammatory and cytotoxic setting (By similarity). Binds to a number of mRNAs containing multiple copies of GG or CC motifs and partially inhibits their translation but dissociates following oxidative stress . Metal-binding protein able to bind copper as well as toxic mercury ions, enhances the cell protection mechanism against induced metal toxicity . In macrophages, interacts with the NADPH oxidase subunit NCF1 to direct NADPH oxidase-dependent ROS production, and protects against sepsis (By similarity). . |
Accessions | ENST00000338639.10 ENST00000493373.5 K7EN27 Q99497 ENST00000377488.5 K7ELW0 ENST00000377491.5 ENST00000493678.5 ENST00000469225.1 ENST00000377493.9 |