Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 20 studies | 56% ± 14% | |
lung | 18 studies | 64% ± 15% | |
intestine | 12 studies | 53% ± 21% | |
kidney | 9 studies | 63% ± 14% | |
brain | 9 studies | 36% ± 16% | |
eye | 9 studies | 52% ± 20% | |
bone marrow | 6 studies | 43% ± 16% | |
lymph node | 6 studies | 59% ± 14% | |
liver | 6 studies | 59% ± 24% | |
pancreas | 5 studies | 68% ± 21% | |
uterus | 5 studies | 66% ± 20% | |
placenta | 4 studies | 70% ± 21% | |
prostate | 4 studies | 54% ± 10% | |
breast | 4 studies | 61% ± 10% | |
adrenal gland | 3 studies | 59% ± 8% | |
esophagus | 3 studies | 62% ± 26% | |
skin | 3 studies | 48% ± 15% | |
thymus | 3 studies | 71% ± 19% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 5619.95 | 258 / 258 | 100% | 294.00 | 230 / 230 |
esophagus | 100% | 4041.86 | 1445 / 1445 | 100% | 131.38 | 183 / 183 |
ovary | 100% | 3313.03 | 180 / 180 | 100% | 231.56 | 430 / 430 |
stomach | 100% | 3072.10 | 359 / 359 | 100% | 157.05 | 286 / 286 |
thymus | 100% | 4203.68 | 653 / 653 | 100% | 233.42 | 605 / 605 |
uterus | 100% | 3446.31 | 170 / 170 | 100% | 231.96 | 459 / 459 |
skin | 100% | 3607.52 | 1808 / 1809 | 100% | 173.05 | 472 / 472 |
kidney | 100% | 5261.34 | 89 / 89 | 100% | 151.82 | 900 / 901 |
brain | 100% | 4951.55 | 2642 / 2642 | 100% | 226.31 | 704 / 705 |
prostate | 100% | 3977.04 | 245 / 245 | 100% | 208.59 | 501 / 502 |
intestine | 100% | 3852.07 | 966 / 966 | 100% | 176.02 | 525 / 527 |
liver | 100% | 2711.56 | 225 / 226 | 100% | 170.06 | 406 / 406 |
bladder | 100% | 3803.00 | 21 / 21 | 99% | 217.35 | 501 / 504 |
lung | 100% | 3476.96 | 576 / 578 | 100% | 172.07 | 1152 / 1155 |
breast | 100% | 3683.17 | 459 / 459 | 99% | 202.91 | 1111 / 1118 |
pancreas | 99% | 1605.30 | 324 / 328 | 100% | 168.04 | 178 / 178 |
adipose | 100% | 3566.11 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 136.18 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 289.30 | 29 / 29 |
spleen | 100% | 3864.87 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 175.12 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 160.39 | 1 / 1 |
blood vessel | 100% | 4309.93 | 1333 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 3930.74 | 801 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 5139.35 | 851 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 3652.26 | 906 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0000398 | Biological process | mRNA splicing, via spliceosome |
GO_1903955 | Biological process | positive regulation of protein targeting to mitochondrion |
GO_0036211 | Biological process | protein modification process |
GO_0015030 | Cellular component | Cajal body |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0031386 | Molecular function | protein tag activity |
GO_0005515 | Molecular function | protein binding |
Gene name | UBL5 |
Protein name | Ubiquitin-like protein 5 Ubiquitin like 5 |
Synonyms | hCG_2033693 |
Description | FUNCTION: Ubiquitin-like protein that plays a role in cell proliferation and sister chromatid cohesion by associating with spliceosomal proteins . Participates thereby in pre-mRNA splicing by maintaining spliceosome integrity. Promotes the functional integrity of the Fanconi anemia DNA repair pathway by interacting with FANCI component and subsequently mediating the formation of FANCI homodimers . Plays also a protective role against ER stress-induced apoptosis . . |
Accessions | ENST00000593087.1 ENST00000590068.1 Q9BZL1 A0A024R7B0 K7EQ43 ENST00000586895.6 ENST00000358666.7 |