Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 20 studies | 93% ± 12% | |
lung | 19 studies | 87% ± 19% | |
brain | 14 studies | 48% ± 20% | |
intestine | 13 studies | 92% ± 15% | |
eye | 10 studies | 71% ± 21% | |
kidney | 8 studies | 85% ± 19% | |
liver | 7 studies | 73% ± 22% | |
bone marrow | 6 studies | 95% ± 5% | |
pancreas | 5 studies | 85% ± 17% | |
heart | 5 studies | 45% ± 20% | |
uterus | 5 studies | 94% ± 10% | |
lymph node | 4 studies | 100% ± 1% | |
placenta | 4 studies | 90% ± 17% | |
adipose | 4 studies | 60% ± 24% | |
esophagus | 4 studies | 81% ± 20% | |
prostate | 4 studies | 95% ± 9% | |
breast | 4 studies | 98% ± 3% | |
skin | 3 studies | 84% ± 20% | |
stomach | 3 studies | 79% ± 14% | |
thymus | 3 studies | 77% ± 32% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 63107.59 | 1445 / 1445 | 100% | 1016.54 | 183 / 183 |
ovary | 100% | 101603.38 | 180 / 180 | 100% | 1858.97 | 430 / 430 |
skin | 100% | 119914.83 | 1809 / 1809 | 100% | 1936.45 | 472 / 472 |
uterus | 100% | 70849.15 | 170 / 170 | 100% | 1756.39 | 459 / 459 |
liver | 100% | 26802.19 | 225 / 226 | 100% | 981.36 | 406 / 406 |
thymus | 100% | 40326.27 | 650 / 653 | 100% | 1326.21 | 604 / 605 |
prostate | 100% | 68336.41 | 245 / 245 | 99% | 1821.14 | 498 / 502 |
intestine | 100% | 62413.99 | 966 / 966 | 99% | 1486.09 | 522 / 527 |
stomach | 100% | 56801.62 | 359 / 359 | 99% | 1236.33 | 282 / 286 |
pancreas | 100% | 38323.45 | 327 / 328 | 99% | 1231.48 | 176 / 178 |
kidney | 100% | 43287.83 | 89 / 89 | 99% | 851.07 | 888 / 901 |
breast | 100% | 67044.87 | 459 / 459 | 98% | 1386.16 | 1095 / 1118 |
bladder | 100% | 72924.52 | 21 / 21 | 98% | 1561.56 | 493 / 504 |
lung | 99% | 49523.82 | 575 / 578 | 98% | 1330.30 | 1135 / 1155 |
adrenal gland | 100% | 51203.18 | 258 / 258 | 96% | 805.96 | 221 / 230 |
brain | 90% | 20663.61 | 2385 / 2642 | 99% | 800.81 | 699 / 705 |
eye | 0% | 0 | 0 / 0 | 100% | 3616.05 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 2875.80 | 29 / 29 |
muscle | 100% | 92699.62 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 65837.99 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 1437.99 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 1331.62 | 1 / 1 |
blood vessel | 100% | 74994.06 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 59235.20 | 1202 / 1204 | 0% | 0 | 0 / 0 |
heart | 98% | 39972.17 | 842 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 96% | 54936.93 | 892 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006412 | Biological process | translation |
GO_0006414 | Biological process | translational elongation |
GO_0002181 | Biological process | cytoplasmic translation |
GO_0022626 | Cellular component | cytosolic ribosome |
GO_0005829 | Cellular component | cytosol |
GO_0022625 | Cellular component | cytosolic large ribosomal subunit |
GO_0005737 | Cellular component | cytoplasm |
GO_0005925 | Cellular component | focal adhesion |
GO_0030295 | Molecular function | protein kinase activator activity |
GO_0003735 | Molecular function | structural constituent of ribosome |
GO_0043021 | Molecular function | ribonucleoprotein complex binding |
GO_0005515 | Molecular function | protein binding |
Gene name | RPLP1 |
Protein name | Large ribosomal subunit protein P1 (60S acidic ribosomal protein P1) Ribosomal protein lateral stalk subunit P1 |
Synonyms | RRP1 |
Description | FUNCTION: Plays an important role in the elongation step of protein synthesis. FUNCTION: Plays an important role in the elongation step of protein synthesis. . FUNCTION: Plays an important role in the elongation step of protein synthesis. . FUNCTION: Plays an important role in the elongation step of protein synthesis. . |
Accessions | P05386 H0YL57 ENST00000560274.1 ENST00000357790.5 [P05386-2] Q6FG99 ENST00000260379.11 [P05386-1] Q6ICQ4 |