Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 20 studies | 83% ± 12% | |
lung | 18 studies | 67% ± 17% | |
intestine | 13 studies | 69% ± 24% | |
kidney | 9 studies | 66% ± 21% | |
eye | 8 studies | 39% ± 19% | |
brain | 7 studies | 40% ± 23% | |
liver | 7 studies | 63% ± 21% | |
bone marrow | 6 studies | 69% ± 26% | |
lymph node | 6 studies | 89% ± 5% | |
pancreas | 5 studies | 78% ± 19% | |
uterus | 5 studies | 79% ± 18% | |
placenta | 4 studies | 78% ± 16% | |
prostate | 4 studies | 73% ± 29% | |
breast | 4 studies | 87% ± 4% | |
heart | 3 studies | 33% ± 17% | |
adipose | 3 studies | 44% ± 30% | |
adrenal gland | 3 studies | 65% ± 22% | |
esophagus | 3 studies | 71% ± 16% | |
skin | 3 studies | 59% ± 26% | |
thymus | 3 studies | 79% ± 23% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 18063.91 | 1445 / 1445 | 100% | 345.16 | 183 / 183 |
ovary | 100% | 27091.06 | 180 / 180 | 100% | 608.94 | 430 / 430 |
prostate | 100% | 13662.57 | 245 / 245 | 100% | 437.37 | 502 / 502 |
stomach | 100% | 13745.53 | 359 / 359 | 100% | 626.48 | 286 / 286 |
intestine | 100% | 18029.52 | 966 / 966 | 100% | 807.51 | 526 / 527 |
bladder | 100% | 17835.76 | 21 / 21 | 100% | 557.22 | 502 / 504 |
uterus | 100% | 19754.85 | 170 / 170 | 100% | 470.95 | 457 / 459 |
pancreas | 100% | 31224.57 | 328 / 328 | 99% | 473.61 | 177 / 178 |
lung | 99% | 13547.80 | 575 / 578 | 100% | 490.56 | 1154 / 1155 |
brain | 99% | 9115.26 | 2625 / 2642 | 100% | 405.38 | 705 / 705 |
thymus | 100% | 10681.25 | 652 / 653 | 100% | 455.39 | 602 / 605 |
breast | 100% | 20867.15 | 459 / 459 | 99% | 451.95 | 1110 / 1118 |
kidney | 100% | 13308.39 | 89 / 89 | 99% | 410.28 | 892 / 901 |
skin | 100% | 26363.76 | 1809 / 1809 | 99% | 427.57 | 467 / 472 |
liver | 99% | 8700.85 | 223 / 226 | 99% | 386.54 | 403 / 406 |
adrenal gland | 100% | 13944.42 | 258 / 258 | 95% | 321.66 | 219 / 230 |
lymph node | 0% | 0 | 0 / 0 | 100% | 1168.85 | 29 / 29 |
muscle | 100% | 20757.91 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 20570.68 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 489.03 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 289.75 | 1 / 1 |
adipose | 100% | 18609.10 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 14555.85 | 1333 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 651.70 | 79 / 80 |
heart | 94% | 8284.21 | 807 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 54% | 11888.94 | 502 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006414 | Biological process | translational elongation |
GO_0005853 | Cellular component | eukaryotic translation elongation factor 1 complex |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005085 | Molecular function | guanyl-nucleotide exchange factor activity |
GO_0003746 | Molecular function | translation elongation factor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | EEF1B2 |
Protein name | Elongation factor 1-beta (EF-1-beta) Elongation factor 1-beta Elongation factor 1-beta (Eukaryotic translation elongation factor 1 beta 2) |
Synonyms | EF1B EEF1B |
Description | FUNCTION: EF-1-beta and EF-1-delta stimulate the exchange of GDP bound to EF-1-alpha to GTP. FUNCTION: EF-1-beta and EF-1-delta stimulate the exchange of GDP bound to EF-1-alpha to GTP. . |
Accessions | ENST00000638006.1 P24534 ENST00000236957.9 ENST00000392222.7 ENST00000636275.2 ENST00000637253.1 ENST00000635965.1 ENST00000635728.1 F8WF65 C9JZW3 ENST00000429769.5 F2Z2G2 ENST00000637452.1 ENST00000392221.5 ENST00000637177.1 F8WFC9 ENST00000415904.1 ENST00000455150.1 ENST00000435123.1 ENST00000637715.1 ENST00000445505.5 |