Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 20 studies | 91% ± 14% | |
lung | 19 studies | 83% ± 20% | |
brain | 14 studies | 42% ± 22% | |
intestine | 13 studies | 89% ± 16% | |
eye | 10 studies | 57% ± 22% | |
kidney | 8 studies | 79% ± 22% | |
liver | 7 studies | 68% ± 26% | |
bone marrow | 6 studies | 91% ± 9% | |
pancreas | 5 studies | 83% ± 15% | |
uterus | 5 studies | 91% ± 13% | |
lymph node | 4 studies | 99% ± 2% | |
placenta | 4 studies | 87% ± 22% | |
heart | 4 studies | 43% ± 18% | |
adipose | 4 studies | 56% ± 26% | |
esophagus | 4 studies | 73% ± 25% | |
prostate | 4 studies | 87% ± 22% | |
breast | 4 studies | 95% ± 3% | |
skin | 3 studies | 82% ± 21% | |
stomach | 3 studies | 65% ± 21% | |
thymus | 3 studies | 79% ± 29% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 28414.04 | 1445 / 1445 | 100% | 1079.35 | 183 / 183 |
ovary | 100% | 57614.10 | 180 / 180 | 100% | 1991.93 | 430 / 430 |
pancreas | 100% | 25604.56 | 328 / 328 | 100% | 1464.14 | 178 / 178 |
uterus | 100% | 34256.36 | 170 / 170 | 100% | 1647.81 | 459 / 459 |
thymus | 100% | 25134.21 | 652 / 653 | 100% | 1662.18 | 605 / 605 |
skin | 100% | 46072.63 | 1809 / 1809 | 100% | 1567.56 | 470 / 472 |
intestine | 100% | 31314.36 | 966 / 966 | 99% | 1842.05 | 524 / 527 |
prostate | 100% | 29510.98 | 245 / 245 | 99% | 1906.96 | 499 / 502 |
stomach | 100% | 22950.68 | 359 / 359 | 99% | 1577.68 | 284 / 286 |
kidney | 100% | 21318.27 | 89 / 89 | 99% | 1035.60 | 893 / 901 |
bladder | 100% | 32608.10 | 21 / 21 | 99% | 1640.75 | 499 / 504 |
breast | 100% | 49868.09 | 459 / 459 | 98% | 1310.80 | 1099 / 1118 |
lung | 100% | 26165.17 | 576 / 578 | 99% | 1225.69 | 1139 / 1155 |
adrenal gland | 100% | 23016.21 | 258 / 258 | 98% | 878.02 | 225 / 230 |
brain | 97% | 12165.83 | 2570 / 2642 | 99% | 1052.81 | 701 / 705 |
liver | 92% | 10172.70 | 209 / 226 | 100% | 1055.79 | 405 / 406 |
adipose | 100% | 52185.20 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 3325.16 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 4386.15 | 29 / 29 |
spleen | 100% | 39732.20 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 1313.54 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 1896.85 | 1 / 1 |
blood vessel | 100% | 27980.09 | 1334 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 40059.81 | 924 / 929 | 0% | 0 | 0 / 0 |
muscle | 99% | 24661.32 | 794 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 16115.52 | 831 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006412 | Biological process | translation |
GO_0002182 | Biological process | cytoplasmic translational elongation |
GO_0002181 | Biological process | cytoplasmic translation |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005829 | Cellular component | cytosol |
GO_0016020 | Cellular component | membrane |
GO_0022625 | Cellular component | cytosolic large ribosomal subunit |
GO_0005737 | Cellular component | cytoplasm |
GO_0005925 | Cellular component | focal adhesion |
GO_0003735 | Molecular function | structural constituent of ribosome |
GO_0005515 | Molecular function | protein binding |
Gene name | RPLP2 |
Protein name | Large ribosomal subunit protein P2 (60S acidic ribosomal protein P2) (Renal carcinoma antigen NY-REN-44) Large ribosomal subunit protein P2 (60S acidic ribosomal protein P2) |
Synonyms | D11S2243E RPP2 |
Description | FUNCTION: Plays an important role in the elongation step of protein synthesis. FUNCTION: Plays an important role in the elongation step of protein synthesis. . |
Accessions | ENST00000530398.1 ENST00000530797.5 H0YDD8 P05387 ENST00000321153.9 |