POMP report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	43 studies	54% ± 23%	Explore
B cell	38 studies	38% ± 15%	Explore
macrophage	38 studies	57% ± 18%	Explore
natural killer cell	37 studies	46% ± 12%	Explore
fibroblast	37 studies	46% ± 18%	Explore
CD8-positive, alpha-beta T cell	33 studies	42% ± 18%	Explore
pericyte	32 studies	55% ± 18%	Explore
CD4-positive, alpha-beta T cell	30 studies	37% ± 17%	Explore
T cell	29 studies	41% ± 16%	Explore
conventional dendritic cell	28 studies	60% ± 15%	Explore
smooth muscle cell	25 studies	52% ± 14%	Explore
classical monocyte	25 studies	52% ± 15%	Explore
plasmacytoid dendritic cell	24 studies	55% ± 15%	Explore
dendritic cell	23 studies	51% ± 21%	Explore
non-classical monocyte	23 studies	61% ± 14%	Explore
monocyte	22 studies	53% ± 18%	Explore
epithelial cell	22 studies	53% ± 21%	Explore
regulatory T cell	22 studies	41% ± 13%	Explore
mast cell	20 studies	41% ± 14%	Explore
basal cell	20 studies	51% ± 19%	Explore
memory B cell	19 studies	32% ± 11%	Explore
naive B cell	19 studies	34% ± 9%	Explore
mature NK T cell	18 studies	38% ± 10%	Explore
endothelial cell of lymphatic vessel	17 studies	52% ± 13%	Explore
connective tissue cell	17 studies	53% ± 15%	Explore
gamma-delta T cell	17 studies	40% ± 14%	Explore
plasma cell	16 studies	50% ± 13%	Explore
ciliated cell	16 studies	58% ± 18%	Explore
capillary endothelial cell	16 studies	51% ± 15%	Explore
CD16-positive, CD56-dim natural killer cell, human	14 studies	44% ± 12%	Explore
CD16-negative, CD56-bright natural killer cell, human	14 studies	35% ± 13%	Explore
endothelial cell of artery	14 studies	62% ± 16%	Explore
vein endothelial cell	14 studies	50% ± 18%	Explore
myofibroblast cell	13 studies	48% ± 15%	Explore
plasmablast	12 studies	57% ± 22%	Explore
CD8-positive, alpha-beta memory T cell	12 studies	39% ± 17%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	12 studies	27% ± 7%	Explore
mucosal invariant T cell	12 studies	30% ± 7%	Explore
endothelial cell of vascular tree	12 studies	65% ± 16%	Explore
myeloid cell	12 studies	58% ± 18%	Explore
CD4-positive, alpha-beta memory T cell	11 studies	34% ± 16%	Explore
secretory cell	11 studies	54% ± 17%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	11 studies	36% ± 13%	Explore
progenitor cell	10 studies	53% ± 14%	Explore
abnormal cell	10 studies	44% ± 18%	Explore
goblet cell	10 studies	44% ± 19%	Explore
mesothelial cell	10 studies	47% ± 17%	Explore
leukocyte	9 studies	46% ± 15%	Explore
effector memory CD8-positive, alpha-beta T cell	9 studies	37% ± 14%	Explore
type I pneumocyte	8 studies	38% ± 15%	Explore
type II pneumocyte	8 studies	36% ± 21%	Explore
neutrophil	8 studies	35% ± 14%	Explore
innate lymphoid cell	8 studies	46% ± 14%	Explore
neuron	8 studies	46% ± 20%	Explore
enterocyte	8 studies	45% ± 20%	Explore
T follicular helper cell	8 studies	36% ± 9%	Explore
astrocyte	8 studies	33% ± 16%	Explore
club cell	7 studies	58% ± 10%	Explore
effector CD8-positive, alpha-beta T cell	7 studies	51% ± 20%	Explore
epithelial cell of proximal tubule	7 studies	52% ± 14%	Explore
precursor B cell	7 studies	48% ± 14%	Explore
alveolar macrophage	6 studies	63% ± 23%	Explore
ionocyte	6 studies	50% ± 20%	Explore
respiratory goblet cell	6 studies	52% ± 22%	Explore
platelet	6 studies	22% ± 6%	Explore
effector CD4-positive, alpha-beta T cell	6 studies	48% ± 18%	Explore
mononuclear phagocyte	6 studies	63% ± 20%	Explore
kidney loop of Henle epithelial cell	6 studies	46% ± 5%	Explore
renal alpha-intercalated cell	6 studies	60% ± 11%	Explore
transit amplifying cell	6 studies	36% ± 19%	Explore
microglial cell	6 studies	38% ± 21%	Explore
erythrocyte	6 studies	45% ± 24%	Explore
hematopoietic precursor cell	5 studies	53% ± 26%	Explore
exhausted T cell	5 studies	52% ± 16%	Explore
kidney distal convoluted tubule epithelial cell	5 studies	58% ± 15%	Explore
enteroendocrine cell	5 studies	55% ± 21%	Explore
IgG plasma cell	5 studies	28% ± 12%	Explore
retinal ganglion cell	5 studies	62% ± 33%	Explore
retinal cone cell	5 studies	55% ± 29%	Explore
retinal rod cell	5 studies	39% ± 20%	Explore
hematopoietic stem cell	5 studies	36% ± 15%	Explore
pro-B cell	5 studies	44% ± 11%	Explore
immature B cell	5 studies	47% ± 21%	Explore
intermediate monocyte	5 studies	71% ± 16%	Explore
effector memory CD4-positive, alpha-beta T cell	5 studies	44% ± 20%	Explore
granulocyte	5 studies	43% ± 14%	Explore
deuterosomal cell	4 studies	53% ± 19%	Explore
pancreatic A cell	4 studies	75% ± 13%	Explore
type B pancreatic cell	4 studies	69% ± 12%	Explore
glomerular endothelial cell	4 studies	69% ± 10%	Explore
intestinal crypt stem cell	4 studies	43% ± 15%	Explore
erythroblast	4 studies	63% ± 16%	Explore
megakaryocyte	4 studies	37% ± 12%	Explore
brush cell	4 studies	37% ± 25%	Explore
amacrine cell	4 studies	50% ± 20%	Explore
retina horizontal cell	4 studies	42% ± 22%	Explore
adventitial cell	4 studies	38% ± 9%	Explore
mucus secreting cell	4 studies	48% ± 17%	Explore
acinar cell	4 studies	44% ± 13%	Explore
muscle cell	4 studies	41% ± 22%	Explore
oligodendrocyte	4 studies	24% ± 5%	Explore
germinal center B cell	4 studies	48% ± 15%	Explore
CD4-positive helper T cell	4 studies	29% ± 9%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	57% ± 6%	Explore
GABAergic neuron	4 studies	31% ± 9%	Explore
glutamatergic neuron	4 studies	42% ± 13%	Explore
oligodendrocyte precursor cell	4 studies	35% ± 13%	Explore
hepatocyte	4 studies	52% ± 28%	Explore
T-helper 17 cell	4 studies	49% ± 23%	Explore
T-helper 1 cell	4 studies	51% ± 14%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	4 studies	35% ± 7%	Explore
duct epithelial cell	3 studies	47% ± 8%	Explore
precursor cell	3 studies	66% ± 6%	Explore
pancreatic D cell	3 studies	71% ± 13%	Explore
monocyte-derived dendritic cell	3 studies	61% ± 24%	Explore
podocyte	3 studies	64% ± 9%	Explore
neural crest cell	3 studies	54% ± 9%	Explore
IgA plasma cell	3 studies	29% ± 15%	Explore
retinal bipolar neuron	3 studies	56% ± 24%	Explore
OFF-bipolar cell	3 studies	51% ± 26%	Explore
ON-bipolar cell	3 studies	48% ± 27%	Explore
renal principal cell	3 studies	46% ± 2%	Explore
extravillous trophoblast	3 studies	88% ± 8%	Explore
placental villous trophoblast	3 studies	94% ± 3%	Explore
lymphocyte	3 studies	58% ± 10%	Explore
neuroendocrine cell	3 studies	59% ± 18%	Explore
retinal pigment epithelial cell	3 studies	41% ± 30%	Explore
serous secreting cell	3 studies	52% ± 8%	Explore
tissue-resident macrophage	3 studies	48% ± 21%	Explore
intraepithelial lymphocyte	3 studies	43% ± 19%	Explore
Mueller cell	3 studies	50% ± 10%	Explore
rod bipolar cell	3 studies	38% ± 15%	Explore
chondrocyte	3 studies	36% ± 12%	Explore
endothelial cell of sinusoid	3 studies	40% ± 6%	Explore
myoepithelial cell	3 studies	44% ± 9%	Explore
inflammatory macrophage	3 studies	41% ± 13%	Explore
luminal cell of prostate epithelium	3 studies	41% ± 10%	Explore
pancreatic ductal cell	3 studies	79% ± 5%	Explore
glial cell	3 studies	48% ± 21%	Explore
group 3 innate lymphoid cell	3 studies	42% ± 18%	Explore
keratinocyte	3 studies	51% ± 9%	Explore
interneuron	3 studies	29% ± 10%	Explore
double negative thymocyte	3 studies	57% ± 18%	Explore
progenitor cell of mammary luminal epithelium	3 studies	38% ± 3%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	18 studies	51% ± 14%	Explore
peripheral blood	18 studies	42% ± 12%	Explore
intestine	13 studies	38% ± 18%	Explore
brain	10 studies	33% ± 12%	Explore
kidney	9 studies	48% ± 13%	Explore
eye	9 studies	39% ± 18%	Explore
bone marrow	6 studies	33% ± 14%	Explore
lymph node	6 studies	38% ± 15%	Explore
liver	6 studies	47% ± 22%	Explore
pancreas	5 studies	62% ± 20%	Explore
uterus	5 studies	54% ± 19%	Explore
placenta	4 studies	71% ± 28%	Explore
prostate	4 studies	48% ± 11%	Explore
breast	4 studies	49% ± 3%	Explore
heart	3 studies	34% ± 10%	Explore
adrenal gland	3 studies	41% ± 6%	Explore
esophagus	3 studies	53% ± 24%	Explore
skin	3 studies	42% ± 9%	Explore
thymus	3 studies	62% ± 24%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	3437.52	1445 / 1445	100%	212.62	183 / 183
lung	100%	4033.38	578 / 578	100%	195.77	1155 / 1155
ovary	100%	1881.16	180 / 180	100%	174.02	430 / 430
stomach	100%	2607.50	359 / 359	100%	313.96	286 / 286
uterus	100%	2514.38	170 / 170	100%	245.74	459 / 459
brain	100%	3780.67	2641 / 2642	100%	194.49	705 / 705
skin	100%	4043.91	1806 / 1809	100%	240.62	472 / 472
breast	100%	4037.98	459 / 459	100%	215.41	1116 / 1118
bladder	100%	3316.62	21 / 21	100%	268.58	503 / 504
thymus	100%	3232.80	652 / 653	100%	202.35	604 / 605
kidney	100%	4118.76	89 / 89	100%	152.96	898 / 901
intestine	100%	3521.70	966 / 966	100%	337.04	525 / 527
liver	100%	2765.34	225 / 226	100%	158.13	406 / 406
prostate	100%	2923.78	244 / 245	100%	170.51	500 / 502
adrenal gland	100%	4064.84	258 / 258	99%	159.93	228 / 230
pancreas	98%	1495.69	320 / 328	100%	202.41	178 / 178
lymph node	0%	0	0 / 0	100%	343.32	29 / 29
muscle	100%	6047.44	803 / 803	0%	0	0 / 0
spleen	100%	3605.74	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	195.86	45 / 45
ureter	0%	0	0 / 0	100%	104.20	1 / 1
adipose	100%	4544.44	1203 / 1204	0%	0	0 / 0
blood vessel	100%	4133.73	1333 / 1335	0%	0	0 / 0
heart	100%	4438.57	858 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	99%	124.89	79 / 80
peripheral blood	95%	3571.46	884 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0