Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 15 studies | 38% ± 14% | |
lung | 14 studies | 40% ± 19% | |
intestine | 11 studies | 43% ± 21% | |
kidney | 8 studies | 47% ± 19% | |
eye | 8 studies | 33% ± 17% | |
brain | 6 studies | 33% ± 16% | |
liver | 5 studies | 38% ± 25% | |
uterus | 4 studies | 62% ± 9% | |
breast | 4 studies | 28% ± 12% | |
pancreas | 3 studies | 60% ± 19% | |
placenta | 3 studies | 80% ± 10% | |
bone marrow | 3 studies | 32% ± 20% | |
lymph node | 3 studies | 41% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 5421.61 | 1445 / 1445 | 96% | 2.07 | 175 / 183 |
ovary | 100% | 3840.87 | 180 / 180 | 93% | 2.42 | 400 / 430 |
brain | 100% | 7318.07 | 2641 / 2642 | 90% | 2.20 | 638 / 705 |
prostate | 100% | 5664.78 | 245 / 245 | 89% | 1.93 | 445 / 502 |
stomach | 100% | 4551.59 | 359 / 359 | 88% | 3.24 | 253 / 286 |
intestine | 100% | 5712.64 | 966 / 966 | 88% | 4.21 | 465 / 527 |
uterus | 100% | 4304.91 | 170 / 170 | 88% | 1.91 | 405 / 459 |
bladder | 100% | 4749.71 | 21 / 21 | 87% | 3.10 | 440 / 504 |
skin | 100% | 4823.21 | 1808 / 1809 | 87% | 2.03 | 412 / 472 |
pancreas | 99% | 2460.68 | 326 / 328 | 84% | 1.71 | 150 / 178 |
lung | 100% | 4071.59 | 576 / 578 | 76% | 1.52 | 878 / 1155 |
thymus | 100% | 5835.21 | 653 / 653 | 74% | 1.36 | 447 / 605 |
breast | 100% | 4675.45 | 459 / 459 | 66% | 1.30 | 739 / 1118 |
kidney | 100% | 7607.30 | 89 / 89 | 62% | 1.18 | 560 / 901 |
adrenal gland | 100% | 5605.62 | 258 / 258 | 57% | 0.91 | 130 / 230 |
liver | 100% | 4254.31 | 226 / 226 | 40% | 0.74 | 164 / 406 |
adipose | 100% | 4513.68 | 1204 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 8469.79 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 4609.46 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.06 | 1 / 1 |
heart | 100% | 12900.03 | 858 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 5034.38 | 1330 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 1.83 | 28 / 29 |
peripheral blood | 93% | 3195.29 | 860 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 73% | 1.31 | 33 / 45 |
eye | 0% | 0 | 0 / 0 | 55% | 1.06 | 44 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0071300 | Biological process | cellular response to retinoic acid |
GO_0097191 | Biological process | extrinsic apoptotic signaling pathway |
GO_0097190 | Biological process | apoptotic signaling pathway |
GO_0042776 | Biological process | proton motive force-driven mitochondrial ATP synthesis |
GO_0035458 | Biological process | cellular response to interferon-beta |
GO_0072593 | Biological process | reactive oxygen species metabolic process |
GO_0045732 | Biological process | positive regulation of protein catabolic process |
GO_0032981 | Biological process | mitochondrial respiratory chain complex I assembly |
GO_2001243 | Biological process | negative regulation of intrinsic apoptotic signaling pathway |
GO_0009060 | Biological process | aerobic respiration |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_1900119 | Biological process | positive regulation of execution phase of apoptosis |
GO_0030308 | Biological process | negative regulation of cell growth |
GO_0045039 | Biological process | protein insertion into mitochondrial inner membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0031966 | Cellular component | mitochondrial membrane |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005746 | Cellular component | mitochondrial respirasome |
GO_0045271 | Cellular component | respiratory chain complex I |
GO_0061133 | Molecular function | endopeptidase activator activity |
GO_0005524 | Molecular function | ATP binding |
GO_0005515 | Molecular function | protein binding |
Gene name | NDUFA13 |
Protein name | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Cell death regulatory protein GRIM-19) (Complex I-B16.6) (CI-B16.6) (Gene associated with retinoic and interferon-induced mortality 19 protein) (GRIM-19) (Gene associated with retinoic and IFN-induced mortality 19 protein) (NADH-ubiquinone oxidoreductase B16.6 subunit) |
Synonyms | GRIM19 CDA016 CGI-39 |
Description | FUNCTION: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis . Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone . Involved in the interferon/all-trans-retinoic acid (IFN/RA) induced cell death. This apoptotic activity is inhibited by interaction with viral IRF1. Prevents the transactivation of STAT3 target genes. May play a role in CARD15-mediated innate mucosal responses and serve to regulate intestinal epithelial cell responses to microbes . . FUNCTION: Complex I functions in the transfer of electrons from NADH to the respiratory chain. Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. . FUNCTION: Complex I functions in the transfer of electrons from NADH to the respiratory chain. Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. . FUNCTION: Complex I functions in the transfer of electrons from NADH to the respiratory chain. Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. . FUNCTION: Complex I functions in the transfer of electrons from NADH to the respiratory chain. Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. . |
Accessions | U3KQP3 K7EP87 ENST00000502506.6 K7EJE1 ENST00000503283.5 ENST00000507754.9 [Q9P0J0-1] ENST00000428459.6 Q9P0J0 ENST00000606722.1 B4DEZ3 |