Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 18 studies | 68% ± 23% | |
peripheral blood | 17 studies | 80% ± 16% | |
intestine | 12 studies | 74% ± 20% | |
brain | 12 studies | 49% ± 20% | |
kidney | 7 studies | 71% ± 21% | |
liver | 6 studies | 68% ± 18% | |
eye | 5 studies | 74% ± 16% | |
bone marrow | 5 studies | 79% ± 15% | |
lymph node | 4 studies | 77% ± 18% | |
breast | 4 studies | 84% ± 1% | |
heart | 3 studies | 33% ± 18% | |
uterus | 3 studies | 94% ± 4% | |
prostate | 3 studies | 79% ± 4% | |
skin | 3 studies | 77% ± 14% | |
adipose | 3 studies | 64% ± 22% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 636632.70 | 2633 / 2642 | 99% | 8339.83 | 699 / 705 |
adrenal gland | 100% | 389480.48 | 257 / 258 | 99% | 6532.49 | 228 / 230 |
stomach | 100% | 429737.81 | 358 / 359 | 96% | 4140.52 | 274 / 286 |
skin | 99% | 302878.75 | 1793 / 1809 | 96% | 5042.81 | 454 / 472 |
kidney | 97% | 520861.94 | 86 / 89 | 99% | 8821.16 | 889 / 901 |
esophagus | 93% | 308205.63 | 1339 / 1445 | 98% | 4322.65 | 180 / 183 |
liver | 100% | 424960.84 | 225 / 226 | 91% | 4290.62 | 370 / 406 |
breast | 94% | 213574.64 | 430 / 459 | 95% | 4409.18 | 1060 / 1118 |
prostate | 93% | 218061.71 | 229 / 245 | 94% | 4641.23 | 471 / 502 |
intestine | 95% | 330659.64 | 920 / 966 | 91% | 3600.19 | 481 / 527 |
bladder | 95% | 304490.90 | 20 / 21 | 90% | 4228.48 | 453 / 504 |
thymus | 80% | 179997.35 | 522 / 653 | 92% | 6429.75 | 558 / 605 |
lung | 81% | 236042.55 | 471 / 578 | 89% | 3505.78 | 1026 / 1155 |
pancreas | 68% | 109628.66 | 222 / 328 | 96% | 4942.51 | 171 / 178 |
ovary | 59% | 116446.04 | 107 / 180 | 99% | 4375.19 | 424 / 430 |
uterus | 76% | 154136.64 | 129 / 170 | 82% | 3097.11 | 375 / 459 |
eye | 0% | 0 | 0 / 0 | 100% | 7953.61 | 80 / 80 |
heart | 100% | 922387.44 | 861 / 861 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 8651.16 | 1 / 1 |
muscle | 100% | 579432.63 | 801 / 803 | 0% | 0 | 0 / 0 |
adipose | 93% | 264002.26 | 1119 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 82% | 2534.91 | 37 / 45 |
spleen | 78% | 166170.48 | 187 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 77% | 180393.80 | 1022 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 62% | 1532.09 | 18 / 29 |
peripheral blood | 27% | 58246.83 | 250 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0042542 | Biological process | response to hydrogen peroxide |
GO_0009060 | Biological process | aerobic respiration |
GO_0015990 | Biological process | electron transport coupled proton transport |
GO_0001666 | Biological process | response to hypoxia |
GO_0006120 | Biological process | mitochondrial electron transport, NADH to ubiquinone |
GO_0010243 | Biological process | response to organonitrogen compound |
GO_0042776 | Biological process | proton motive force-driven mitochondrial ATP synthesis |
GO_0032981 | Biological process | mitochondrial respiratory chain complex I assembly |
GO_0045271 | Cellular component | respiratory chain complex I |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0003954 | Molecular function | NADH dehydrogenase activity |
GO_0008137 | Molecular function | NADH dehydrogenase (ubiquinone) activity |
Gene name | MT-ND5 |
Protein name | NADH-ubiquinone oxidoreductase chain 5 (EC 7.1.1.2) (NADH dehydrogenase subunit 5) |
Synonyms | MTND5 NADH5 ND5 |
Description | FUNCTION: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) which catalyzes electron transfer from NADH through the respiratory chain, using ubiquinone as an electron acceptor . Essential for the catalytic activity and assembly of complex I . . |
Accessions | P03915 ENST00000361567.2 |