Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 17 studies | 45% ± 17% | |
peripheral blood | 16 studies | 34% ± 9% | |
brain | 15 studies | 29% ± 11% | |
intestine | 13 studies | 41% ± 21% | |
eye | 11 studies | 42% ± 20% | |
kidney | 9 studies | 45% ± 13% | |
liver | 7 studies | 35% ± 25% | |
bone marrow | 5 studies | 28% ± 10% | |
heart | 5 studies | 25% ± 8% | |
lymph node | 5 studies | 39% ± 18% | |
placenta | 4 studies | 61% ± 32% | |
uterus | 4 studies | 58% ± 17% | |
skin | 4 studies | 27% ± 9% | |
prostate | 4 studies | 24% ± 5% | |
breast | 4 studies | 41% ± 10% | |
pancreas | 3 studies | 64% ± 19% | |
adrenal gland | 3 studies | 36% ± 5% | |
esophagus | 3 studies | 44% ± 32% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 38649.01 | 258 / 258 | 100% | 967.21 | 230 / 230 |
thymus | 100% | 25646.84 | 653 / 653 | 100% | 705.25 | 605 / 605 |
uterus | 100% | 26725.54 | 170 / 170 | 100% | 592.99 | 459 / 459 |
esophagus | 100% | 18978.82 | 1444 / 1445 | 100% | 493.75 | 183 / 183 |
brain | 100% | 26745.56 | 2638 / 2642 | 100% | 563.24 | 705 / 705 |
ovary | 100% | 21831.28 | 180 / 180 | 100% | 499.57 | 429 / 430 |
kidney | 100% | 35222.78 | 89 / 89 | 99% | 850.66 | 896 / 901 |
intestine | 100% | 33729.12 | 966 / 966 | 99% | 656.39 | 524 / 527 |
skin | 100% | 21284.00 | 1805 / 1809 | 100% | 1099.14 | 470 / 472 |
stomach | 100% | 26921.37 | 359 / 359 | 99% | 570.37 | 284 / 286 |
pancreas | 99% | 10279.84 | 325 / 328 | 100% | 486.98 | 178 / 178 |
prostate | 100% | 19706.63 | 244 / 245 | 99% | 593.23 | 498 / 502 |
bladder | 100% | 27805.14 | 21 / 21 | 99% | 615.45 | 497 / 504 |
breast | 100% | 24179.74 | 459 / 459 | 98% | 486.68 | 1099 / 1118 |
lung | 100% | 19815.93 | 576 / 578 | 98% | 479.71 | 1136 / 1155 |
liver | 89% | 7772.66 | 202 / 226 | 97% | 350.04 | 392 / 406 |
adipose | 100% | 26486.96 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 1803.31 | 80 / 80 |
heart | 100% | 60983.07 | 861 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 353.21 | 29 / 29 |
spleen | 100% | 15599.06 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 511.68 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 518.89 | 1 / 1 |
blood vessel | 100% | 26420.80 | 1334 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 29113.70 | 928 / 929 | 0% | 0 | 0 / 0 |
muscle | 100% | 19333.07 | 800 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0042475 | Biological process | odontogenesis of dentin-containing tooth |
GO_0001525 | Biological process | angiogenesis |
GO_0072659 | Biological process | protein localization to plasma membrane |
GO_0043434 | Biological process | response to peptide hormone |
GO_0046697 | Biological process | decidualization |
GO_0030593 | Biological process | neutrophil chemotaxis |
GO_0046718 | Biological process | symbiont entry into host cell |
GO_0051591 | Biological process | response to cAMP |
GO_0046689 | Biological process | response to mercury ion |
GO_0007566 | Biological process | embryo implantation |
GO_0007166 | Biological process | cell surface receptor signaling pathway |
GO_0005886 | Cellular component | plasma membrane |
GO_0001750 | Cellular component | photoreceptor outer segment |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0002080 | Cellular component | acrosomal membrane |
GO_0042383 | Cellular component | sarcolemma |
GO_0070062 | Cellular component | extracellular exosome |
GO_0001917 | Cellular component | photoreceptor inner segment |
GO_0005925 | Cellular component | focal adhesion |
GO_0000139 | Cellular component | Golgi membrane |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0005768 | Cellular component | endosome |
GO_0042470 | Cellular component | melanosome |
GO_0016323 | Cellular component | basolateral plasma membrane |
GO_0005537 | Molecular function | D-mannose binding |
GO_0045296 | Molecular function | cadherin binding |
GO_0001618 | Molecular function | virus receptor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | BSG |
Protein name | Basigin (5F7) (Collagenase stimulatory factor) (Extracellular matrix metalloproteinase inducer) (EMMPRIN) (Hepatoma-associated antigen) (HAb18G) (Leukocyte activation antigen M6) (OK blood group antigen) (Tumor cell-derived collagenase stimulatory factor) (TCSF) (CD antigen CD147) Basigin Basigin (Ok blood group) |
Synonyms | UNQ6505/PRO21383 hCG_20562 hEMMPRIN |
Description | FUNCTION: [Isoform 1]: Essential for normal retinal maturation and development (By similarity). Acts as a retinal cell surface receptor for NXNL1 and plays an important role in NXNL1-mediated survival of retinal cone photoreceptors . In association with glucose transporter SLC16A1/GLUT1 and NXNL1, promotes retinal cone survival by enhancing aerobic glycolysis and accelerating the entry of glucose into photoreceptors . May act as a potent stimulator of IL6 secretion in multiple cell lines that include monocytes . .; FUNCTION: [Isoform 1]: (Microbial infection) Erythrocyte receptor for P.falciparum RH5 which is essential for erythrocyte invasion by the merozoite stage of P.falciparum isolates 3D7 and Dd2. .; FUNCTION: [Isoform 2]: Signaling receptor for cyclophilins, essential for PPIA/CYPA and PPIB/CYPB-dependent signaling related to chemotaxis and adhesion of immune cells . Plays an important role in targeting monocarboxylate transporters SLC16A1/GLUT1, SLC16A11 and SLC16A12 to the plasma membrane . Acts as a coreceptor for vascular endothelial growth factor receptor 2 (KDR/VEGFR2) in endothelial cells enhancing its VEGFA-mediated activation and downstream signaling . Promotes angiogenesis through EPAS1/HIF2A-mediated up-regulation of VEGFA (isoform VEGF-165 and VEGF-121) and KDR/VEGFR2 in endothelial cells . Plays a key role in regulating tumor growth, invasion, metastasis and neoangiogenesis by stimulating the production and release of extracellular matrix metalloproteinases and KDR/VEGFR2 by both tumor cells and stromal cells (fibroblasts and endothelial cells) . .; FUNCTION: [Isoform 2]: (Microbial infection) Erythrocyte receptor for P.falciparum RH5 which is essential for erythrocyte invasion by the merozoite stage of P.falciparum isolates 3D7, Dd2, 7G8 and HB3 . Binding of P.falciparum RH5 results in BSG dimerization which triggers an increase in intracellular Ca(2+) in the erythrocyte . This essential step leads to a rearrangement of the erythrocyte cytoskeleton required for the merozoite invasion . .; FUNCTION: [Isoform 2]: (Microbial infection) Can facilitate human SARS coronavirus (SARS-CoV-1) infection via its interaction with virus-associated PPIA/CYPA. .; FUNCTION: [Isoform 2]: (Microbial infection) Can facilitate HIV-1 infection via its interaction with virus-associated PPIA/CYPA. .; FUNCTION: [Isoform 2]: (Microbial infection) First described as a receptor for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), it is not required for SARS-CoV-2 infection. .; FUNCTION: [Isoform 2]: (Microbial infection) Acts as a receptor for measles virus. .; FUNCTION: [Isoform 2]: (Microbial infection) Promotes entry of pentamer-expressing human cytomegalovirus (HCMV) into epithelial and endothelial cells. . |
Accessions | ENST00000545507.6 [P35613-3] ENST00000618006.4 R4GN83 P35613 A0A087X215 A0A2R8YDZ0 ENST00000614867.2 A0A087WUV8 ENST00000576984.3 [P35613-3] ENST00000680552.1 ENST00000346916.9 [P35613-3] ENST00000680326.1 ENST00000576984 ENST00000618112.4 ENST00000353555.9 [P35613-2] Q54A51 ENST00000613627.5 ENST00000573784.6 [P35613-3] ENST00000333511.9 [P35613-1] ENST00000680065.1 [P35613-3] A0A7P0TB04 R4GMX5 ENST00000573216.5 A0A7P0TA85 ENST00000573784 A0A087X2B5 ENST00000679472.1 A0A7P0T8A7 I3L192 |