Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 18 studies | 39% ± 16% | |
peripheral blood | 17 studies | 52% ± 16% | |
brain | 14 studies | 28% ± 12% | |
intestine | 10 studies | 29% ± 13% | |
eye | 8 studies | 27% ± 11% | |
kidney | 6 studies | 29% ± 7% | |
lymph node | 6 studies | 35% ± 14% | |
bone marrow | 5 studies | 40% ± 26% | |
liver | 5 studies | 33% ± 12% | |
uterus | 4 studies | 40% ± 13% | |
breast | 4 studies | 27% ± 11% | |
pancreas | 3 studies | 39% ± 12% | |
placenta | 3 studies | 34% ± 22% | |
prostate | 3 studies | 27% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 22246.22 | 258 / 258 | 100% | 209.24 | 230 / 230 |
ovary | 100% | 15862.16 | 180 / 180 | 100% | 110.28 | 430 / 430 |
pancreas | 100% | 9114.02 | 328 / 328 | 100% | 133.59 | 178 / 178 |
thymus | 100% | 21002.08 | 653 / 653 | 100% | 215.62 | 605 / 605 |
brain | 100% | 22883.53 | 2639 / 2642 | 100% | 114.11 | 705 / 705 |
uterus | 100% | 21040.54 | 170 / 170 | 100% | 126.25 | 458 / 459 |
intestine | 100% | 19939.44 | 966 / 966 | 100% | 127.30 | 525 / 527 |
prostate | 100% | 19454.56 | 245 / 245 | 100% | 161.09 | 500 / 502 |
esophagus | 100% | 19134.69 | 1445 / 1445 | 99% | 85.91 | 182 / 183 |
kidney | 100% | 15241.11 | 89 / 89 | 99% | 113.90 | 896 / 901 |
breast | 100% | 13788.73 | 459 / 459 | 99% | 121.15 | 1109 / 1118 |
lung | 100% | 17134.92 | 577 / 578 | 99% | 101.25 | 1147 / 1155 |
skin | 100% | 12040.05 | 1808 / 1809 | 99% | 102.65 | 467 / 472 |
stomach | 100% | 13152.20 | 359 / 359 | 99% | 111.28 | 282 / 286 |
bladder | 100% | 20148.05 | 21 / 21 | 98% | 139.16 | 496 / 504 |
liver | 100% | 8025.83 | 226 / 226 | 96% | 66.23 | 391 / 406 |
adipose | 100% | 13900.37 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 129.01 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 135.03 | 29 / 29 |
muscle | 100% | 19849.81 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 19524.06 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 122.56 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 155.78 | 1 / 1 |
blood vessel | 100% | 12448.57 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 100% | 21382.89 | 859 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 11898.57 | 899 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0001501 | Biological process | skeletal system development |
GO_0016055 | Biological process | Wnt signaling pathway |
GO_0032091 | Biological process | negative regulation of protein binding |
GO_2000210 | Biological process | positive regulation of anoikis |
GO_0070555 | Biological process | response to interleukin-1 |
GO_0010629 | Biological process | negative regulation of gene expression |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0040008 | Biological process | regulation of growth |
GO_0090090 | Biological process | negative regulation of canonical Wnt signaling pathway |
GO_0060761 | Biological process | negative regulation of response to cytokine stimulus |
GO_0005634 | Cellular component | nucleus |
GO_0003714 | Molecular function | transcription corepressor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | TLE5 |
Protein name | Amino-terminal enhancer of split, isoform CRA_a (TLE family member 5, transcriptional modulator) TLE family member 5, transcriptional modulator TLE family member 5 (Amino-terminal enhancer of split) (Amino enhancer of split) (Gp130-associated protein GAM) (Grg-5) (Groucho-related protein 5) (Protein ESP1) (Protein GRG) (TLE family member 5, transcriptional modulator) |
Synonyms | GRG hCG_2005178 AES GRG5 |
Description | FUNCTION: Transcriptional corepressor. Acts as a dominant repressor towards other family members. Inhibits NF-kappa-B-regulated gene expression. May be required for the initiation and maintenance of the differentiated state. Essential for the transcriptional repressor activity of SIX3 during retina and lens development. . |
Accessions | ENST00000586742.5 ENST00000327141.9 [Q08117-1] K7ELQ8 K7ELE3 ENST00000221561.12 [Q08117-2] ENST00000586839.1 ENST00000585557.1 K7EQH5 Q08117 |