SSR4 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
B cell	43 studies	50% ± 17%	Explore
natural killer cell	38 studies	61% ± 14%	Explore
macrophage	36 studies	53% ± 18%	Explore
fibroblast	36 studies	57% ± 16%	Explore
CD8-positive, alpha-beta T cell	36 studies	58% ± 18%	Explore
T cell	33 studies	52% ± 15%	Explore
endothelial cell	33 studies	50% ± 19%	Explore
CD4-positive, alpha-beta T cell	32 studies	58% ± 16%	Explore
plasma cell	31 studies	86% ± 19%	Explore
conventional dendritic cell	29 studies	65% ± 16%	Explore
pericyte	28 studies	47% ± 15%	Explore
plasmacytoid dendritic cell	28 studies	82% ± 16%	Explore
classical monocyte	26 studies	58% ± 16%	Explore
regulatory T cell	26 studies	55% ± 15%	Explore
dendritic cell	24 studies	56% ± 23%	Explore
smooth muscle cell	24 studies	46% ± 14%	Explore
non-classical monocyte	23 studies	58% ± 16%	Explore
mast cell	22 studies	56% ± 20%	Explore
epithelial cell	22 studies	64% ± 20%	Explore
mature NK T cell	21 studies	58% ± 15%	Explore
basal cell	20 studies	55% ± 20%	Explore
monocyte	19 studies	54% ± 16%	Explore
gamma-delta T cell	19 studies	60% ± 15%	Explore
memory B cell	19 studies	51% ± 9%	Explore
naive B cell	19 studies	44% ± 12%	Explore
connective tissue cell	19 studies	58% ± 17%	Explore
endothelial cell of lymphatic vessel	18 studies	61% ± 13%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	17 studies	52% ± 16%	Explore
mucosal invariant T cell	16 studies	62% ± 18%	Explore
ciliated cell	16 studies	64% ± 20%	Explore
CD16-negative, CD56-bright natural killer cell, human	15 studies	62% ± 19%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	14 studies	60% ± 17%	Explore
CD16-positive, CD56-dim natural killer cell, human	14 studies	65% ± 14%	Explore
myofibroblast cell	13 studies	55% ± 15%	Explore
myeloid cell	13 studies	57% ± 22%	Explore
plasmablast	12 studies	87% ± 12%	Explore
CD8-positive, alpha-beta memory T cell	12 studies	58% ± 20%	Explore
secretory cell	12 studies	67% ± 18%	Explore
capillary endothelial cell	12 studies	44% ± 14%	Explore
endothelial cell of artery	12 studies	48% ± 16%	Explore
goblet cell	12 studies	59% ± 19%	Explore
effector memory CD8-positive, alpha-beta T cell	11 studies	57% ± 22%	Explore
innate lymphoid cell	11 studies	54% ± 16%	Explore
CD4-positive, alpha-beta memory T cell	11 studies	61% ± 15%	Explore
vein endothelial cell	11 studies	52% ± 14%	Explore
endothelial cell of vascular tree	11 studies	46% ± 11%	Explore
platelet	10 studies	50% ± 15%	Explore
progenitor cell	10 studies	62% ± 22%	Explore
mesothelial cell	10 studies	65% ± 18%	Explore
IgG plasma cell	10 studies	84% ± 20%	Explore
type II pneumocyte	9 studies	64% ± 27%	Explore
abnormal cell	9 studies	61% ± 20%	Explore
IgA plasma cell	9 studies	84% ± 21%	Explore
T follicular helper cell	9 studies	52% ± 13%	Explore
type I pneumocyte	8 studies	52% ± 15%	Explore
club cell	8 studies	69% ± 21%	Explore
leukocyte	8 studies	59% ± 8%	Explore
effector CD8-positive, alpha-beta T cell	7 studies	67% ± 15%	Explore
epithelial cell of proximal tubule	7 studies	40% ± 16%	Explore
enteroendocrine cell	7 studies	69% ± 27%	Explore
hematopoietic stem cell	7 studies	66% ± 12%	Explore
hematopoietic precursor cell	6 studies	59% ± 25%	Explore
ionocyte	6 studies	50% ± 12%	Explore
respiratory goblet cell	6 studies	59% ± 20%	Explore
effector CD4-positive, alpha-beta T cell	6 studies	67% ± 19%	Explore
kidney loop of Henle epithelial cell	6 studies	47% ± 15%	Explore
renal alpha-intercalated cell	6 studies	66% ± 7%	Explore
megakaryocyte	6 studies	62% ± 17%	Explore
enterocyte	6 studies	53% ± 14%	Explore
precursor B cell	6 studies	45% ± 15%	Explore
brush cell	6 studies	50% ± 24%	Explore
neuron	6 studies	53% ± 25%	Explore
erythrocyte	6 studies	42% ± 16%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	69% ± 15%	Explore
alveolar macrophage	5 studies	58% ± 7%	Explore
CD4-positive helper T cell	5 studies	51% ± 12%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	55% ± 15%	Explore
exhausted T cell	5 studies	75% ± 8%	Explore
mononuclear phagocyte	5 studies	67% ± 15%	Explore
kidney distal convoluted tubule epithelial cell	5 studies	54% ± 10%	Explore
transit amplifying cell	5 studies	54% ± 25%	Explore
neuroendocrine cell	5 studies	85% ± 19%	Explore
T-helper 17 cell	5 studies	69% ± 14%	Explore
group 3 innate lymphoid cell	5 studies	70% ± 10%	Explore
immature B cell	5 studies	58% ± 11%	Explore
mucus secreting cell	5 studies	64% ± 29%	Explore
double negative thymocyte	5 studies	65% ± 12%	Explore
intermediate monocyte	5 studies	69% ± 12%	Explore
granulocyte	5 studies	60% ± 17%	Explore
central memory CD8-positive, alpha-beta T cell	4 studies	58% ± 16%	Explore
deuterosomal cell	4 studies	50% ± 17%	Explore
duct epithelial cell	4 studies	84% ± 8%	Explore
pancreatic A cell	4 studies	81% ± 21%	Explore
type B pancreatic cell	4 studies	78% ± 23%	Explore
glomerular endothelial cell	4 studies	46% ± 12%	Explore
intestinal crypt stem cell	4 studies	57% ± 19%	Explore
erythroblast	4 studies	42% ± 19%	Explore
pro-B cell	4 studies	42% ± 11%	Explore
astrocyte	4 studies	34% ± 17%	Explore
adventitial cell	4 studies	67% ± 12%	Explore
neutrophil	4 studies	32% ± 7%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	68% ± 6%	Explore
luminal cell of prostate epithelium	4 studies	60% ± 20%	Explore
IgM plasma cell	4 studies	87% ± 10%	Explore
T-helper 1 cell	4 studies	69% ± 10%	Explore
CD4-positive, alpha-beta cytotoxic T cell	3 studies	64% ± 21%	Explore
precursor cell	3 studies	72% ± 4%	Explore
squamous epithelial cell	3 studies	42% ± 27%	Explore
pancreatic D cell	3 studies	84% ± 20%	Explore
monocyte-derived dendritic cell	3 studies	65% ± 25%	Explore
podocyte	3 studies	63% ± 7%	Explore
neural crest cell	3 studies	53% ± 5%	Explore
paneth cell	3 studies	83% ± 5%	Explore
renal principal cell	3 studies	58% ± 5%	Explore
thymocyte	3 studies	48% ± 24%	Explore
extravillous trophoblast	3 studies	93% ± 4%	Explore
placental villous trophoblast	3 studies	83% ± 9%	Explore
common myeloid progenitor	3 studies	62% ± 23%	Explore
lymphocyte	3 studies	68% ± 12%	Explore
retinal cone cell	3 studies	55% ± 13%	Explore
retinal rod cell	3 studies	35% ± 14%	Explore
microglial cell	3 studies	47% ± 16%	Explore
serous secreting cell	3 studies	81% ± 18%	Explore
intraepithelial lymphocyte	3 studies	58% ± 12%	Explore
Mueller cell	3 studies	33% ± 9%	Explore
acinar cell	3 studies	66% ± 22%	Explore
endothelial cell of sinusoid	3 studies	23% ± 4%	Explore
muscle cell	3 studies	33% ± 14%	Explore
germinal center B cell	3 studies	35% ± 4%	Explore
myoepithelial cell	3 studies	50% ± 23%	Explore
inflammatory macrophage	3 studies	43% ± 10%	Explore
granulocyte monocyte progenitor cell	3 studies	82% ± 10%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	69% ± 30%	Explore
glial cell	3 studies	53% ± 22%	Explore
hepatocyte	3 studies	65% ± 23%	Explore
keratinocyte	3 studies	52% ± 3%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	67% ± 5%	Explore
double-positive, alpha-beta thymocyte	3 studies	69% ± 6%	Explore
progenitor cell of mammary luminal epithelium	3 studies	68% ± 5%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
peripheral blood	20 studies	58% ± 15%	Explore
lung	18 studies	57% ± 16%	Explore
intestine	13 studies	53% ± 20%	Explore
kidney	9 studies	49% ± 17%	Explore
eye	6 studies	32% ± 14%	Explore
bone marrow	6 studies	48% ± 24%	Explore
lymph node	6 studies	55% ± 18%	Explore
pancreas	5 studies	65% ± 27%	Explore
uterus	5 studies	63% ± 26%	Explore
liver	5 studies	56% ± 17%	Explore
placenta	4 studies	62% ± 23%	Explore
brain	4 studies	41% ± 14%	Explore
prostate	4 studies	51% ± 9%	Explore
breast	4 studies	59% ± 6%	Explore
adrenal gland	3 studies	50% ± 14%	Explore
esophagus	3 studies	56% ± 24%	Explore
skin	3 studies	39% ± 16%	Explore
thymus	3 studies	60% ± 24%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
adrenal gland	100%	8283.75	258 / 258	100%	229.45	230 / 230
skin	100%	5707.05	1809 / 1809	100%	156.28	472 / 472
thymus	100%	6490.05	653 / 653	100%	139.30	605 / 605
uterus	100%	5794.18	170 / 170	100%	151.52	459 / 459
ovary	100%	4664.35	180 / 180	100%	138.54	429 / 430
liver	100%	6874.25	226 / 226	100%	116.78	405 / 406
esophagus	100%	4586.44	1445 / 1445	99%	87.90	182 / 183
pancreas	100%	16096.85	328 / 328	99%	165.57	177 / 178
intestine	100%	6116.67	966 / 966	99%	170.59	524 / 527
lung	100%	6685.91	578 / 578	99%	177.24	1147 / 1155
stomach	100%	7341.18	359 / 359	99%	151.84	284 / 286
prostate	100%	7796.87	245 / 245	99%	225.70	498 / 502
kidney	100%	5240.88	89 / 89	99%	91.19	893 / 901
bladder	100%	5527.76	21 / 21	99%	157.45	498 / 504
brain	99%	3006.19	2618 / 2642	100%	95.11	703 / 705
breast	100%	5532.99	459 / 459	99%	144.10	1102 / 1118
eye	0%	0	0 / 0	100%	136.12	80 / 80
lymph node	0%	0	0 / 0	100%	176.19	29 / 29
spleen	100%	10509.93	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	129.46	45 / 45
ureter	0%	0	0 / 0	100%	81.29	1 / 1
adipose	100%	4888.67	1202 / 1204	0%	0	0 / 0
blood vessel	100%	6270.19	1332 / 1335	0%	0	0 / 0
peripheral blood	99%	5707.82	920 / 929	0%	0	0 / 0
heart	97%	4343.76	837 / 861	0%	0	0 / 0
muscle	94%	1985.29	758 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0005783	Cellular component	endoplasmic reticulum
GO_0012505	Cellular component	endomembrane system
GO_0005784	Cellular component	Sec61 translocon complex
GO_0070062	Cellular component	extracellular exosome

Gene name	SSR4
Protein name	Translocon-associated protein subunit delta (TRAP-delta) (Signal sequence receptor subunit delta) (SSR-delta) Translocon-associated protein subunit delta (Signal sequence receptor subunit delta)
Synonyms	TRAPD
Description	FUNCTION: TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins. FUNCTION: TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins. .
Accessions	ENST00000370087.5 ENST00000370086.8 ENST00000370085.3 A6NLM8 ENST00000320857.7 P51571

SSR4 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review