Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 19 studies | 44% ± 17% | |
peripheral blood | 19 studies | 38% ± 11% | |
intestine | 15 studies | 36% ± 19% | |
liver | 10 studies | 48% ± 17% | |
kidney | 9 studies | 45% ± 21% | |
brain | 8 studies | 29% ± 10% | |
uterus | 6 studies | 53% ± 10% | |
pancreas | 5 studies | 32% ± 8% | |
eye | 5 studies | 32% ± 13% | |
heart | 5 studies | 21% ± 4% | |
prostate | 5 studies | 53% ± 15% | |
lymph node | 5 studies | 46% ± 13% | |
adipose | 4 studies | 30% ± 11% | |
breast | 4 studies | 66% ± 11% | |
ovary | 3 studies | 48% ± 14% | |
adrenal gland | 3 studies | 56% ± 13% | |
placenta | 3 studies | 43% ± 18% | |
thymus | 3 studies | 29% ± 3% | |
skin | 3 studies | 54% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 95% | 21497.58 | 620 / 653 | 90% | 785.68 | 546 / 605 |
liver | 100% | 98731.73 | 226 / 226 | 79% | 1295.14 | 319 / 406 |
breast | 90% | 28271.55 | 412 / 459 | 87% | 517.97 | 969 / 1118 |
skin | 80% | 56928.93 | 1447 / 1809 | 94% | 1353.40 | 444 / 472 |
lung | 94% | 35263.91 | 544 / 578 | 77% | 499.64 | 891 / 1155 |
brain | 69% | 10233.13 | 1821 / 2642 | 99% | 1592.15 | 699 / 705 |
prostate | 72% | 19794.40 | 177 / 245 | 90% | 714.53 | 454 / 502 |
adrenal gland | 100% | 46271.17 | 257 / 258 | 63% | 1129.94 | 144 / 230 |
kidney | 87% | 22657.20 | 77 / 89 | 70% | 500.76 | 633 / 901 |
pancreas | 60% | 10710.17 | 198 / 328 | 96% | 926.43 | 171 / 178 |
ovary | 60% | 8853.88 | 108 / 180 | 87% | 573.19 | 372 / 430 |
stomach | 86% | 17025.08 | 307 / 359 | 49% | 179.47 | 141 / 286 |
esophagus | 59% | 8953.65 | 858 / 1445 | 73% | 564.16 | 134 / 183 |
uterus | 32% | 5020.96 | 55 / 170 | 89% | 1150.01 | 407 / 459 |
intestine | 55% | 10621.64 | 527 / 966 | 53% | 254.10 | 280 / 527 |
bladder | 48% | 7318.95 | 10 / 21 | 57% | 644.64 | 289 / 504 |
adipose | 91% | 49057.75 | 1098 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 90% | 827.97 | 26 / 29 |
tonsil | 0% | 0 | 0 / 0 | 89% | 882.41 | 40 / 45 |
blood vessel | 89% | 29133.70 | 1184 / 1335 | 0% | 0 | 0 / 0 |
muscle | 80% | 40702.26 | 645 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 48% | 182.93 | 38 / 80 |
heart | 42% | 6597.59 | 358 / 861 | 0% | 0 | 0 / 0 |
spleen | 17% | 1518.92 | 41 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 8% | 1163.31 | 73 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0071294 | Biological process | cellular response to zinc ion |
GO_0036018 | Biological process | cellular response to erythropoietin |
GO_0071276 | Biological process | cellular response to cadmium ion |
GO_0071280 | Biological process | cellular response to copper ion |
GO_0006878 | Biological process | intracellular copper ion homeostasis |
GO_0036016 | Biological process | cellular response to interleukin-3 |
GO_0010273 | Biological process | detoxification of copper ion |
GO_0045926 | Biological process | negative regulation of growth |
GO_0006882 | Biological process | intracellular zinc ion homeostasis |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0008270 | Molecular function | zinc ion binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | MT2A |
Protein name | Metallothionein Metallothionein-2 (MT-2) (Metallothionein-2A) (Metallothionein-II) (MT-II) |
Synonyms | MT2 CES1 |
Description | FUNCTION: Metallothioneins have a high content of cysteine residues that bind various heavy metals; these proteins are transcriptionally regulated by both heavy metals and glucocorticoids. FUNCTION: Metallothioneins have a high content of cysteine residues that bind various heavy metals; these proteins are transcriptionally regulated by both heavy metals and glucocorticoids. . |
Accessions | ENST00000245185.6 H3BSP9 P02795 ENST00000561491.1 |