Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 20 studies | 81% ± 10% | |
lung | 19 studies | 73% ± 17% | |
brain | 16 studies | 40% ± 19% | |
intestine | 14 studies | 67% ± 24% | |
eye | 10 studies | 59% ± 23% | |
kidney | 9 studies | 76% ± 18% | |
liver | 7 studies | 65% ± 24% | |
bone marrow | 6 studies | 69% ± 13% | |
lymph node | 6 studies | 86% ± 5% | |
pancreas | 5 studies | 81% ± 19% | |
uterus | 5 studies | 81% ± 17% | |
placenta | 4 studies | 81% ± 17% | |
prostate | 4 studies | 70% ± 26% | |
breast | 4 studies | 78% ± 8% | |
heart | 3 studies | 39% ± 16% | |
adipose | 3 studies | 42% ± 23% | |
adrenal gland | 3 studies | 76% ± 8% | |
esophagus | 3 studies | 77% ± 18% | |
skin | 3 studies | 62% ± 21% | |
thymus | 3 studies | 83% ± 19% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 11256.80 | 258 / 258 | 100% | 477.59 | 230 / 230 |
esophagus | 100% | 11576.93 | 1445 / 1445 | 100% | 207.33 | 183 / 183 |
kidney | 100% | 15620.33 | 89 / 89 | 100% | 457.09 | 901 / 901 |
ovary | 100% | 10782.16 | 180 / 180 | 100% | 336.09 | 430 / 430 |
stomach | 100% | 9417.94 | 359 / 359 | 100% | 311.87 | 286 / 286 |
thymus | 100% | 10201.65 | 653 / 653 | 100% | 488.81 | 605 / 605 |
uterus | 100% | 8351.39 | 170 / 170 | 100% | 382.67 | 459 / 459 |
brain | 100% | 11419.76 | 2639 / 2642 | 100% | 305.63 | 705 / 705 |
skin | 100% | 7468.35 | 1806 / 1809 | 100% | 326.30 | 472 / 472 |
intestine | 100% | 13133.07 | 966 / 966 | 100% | 363.62 | 526 / 527 |
bladder | 100% | 10095.95 | 21 / 21 | 100% | 350.41 | 503 / 504 |
liver | 100% | 7100.41 | 225 / 226 | 100% | 379.43 | 406 / 406 |
prostate | 100% | 9155.31 | 245 / 245 | 99% | 410.48 | 499 / 502 |
pancreas | 99% | 6172.02 | 326 / 328 | 100% | 318.40 | 178 / 178 |
lung | 99% | 7050.73 | 574 / 578 | 100% | 278.05 | 1155 / 1155 |
breast | 100% | 8420.01 | 459 / 459 | 99% | 334.75 | 1108 / 1118 |
eye | 0% | 0 | 0 / 0 | 100% | 452.52 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 584.61 | 29 / 29 |
muscle | 100% | 18741.82 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 7761.92 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 330.92 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 170.52 | 1 / 1 |
adipose | 100% | 8394.36 | 1202 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 9699.87 | 1332 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 23282.00 | 848 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 53% | 5133.37 | 490 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006091 | Biological process | generation of precursor metabolites and energy |
GO_0045333 | Biological process | cellular respiration |
GO_0006123 | Biological process | mitochondrial electron transport, cytochrome c to oxygen |
GO_0031966 | Cellular component | mitochondrial membrane |
GO_0005751 | Cellular component | mitochondrial respiratory chain complex IV |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0005515 | Molecular function | protein binding |
Gene name | COX7C |
Protein name | Cytochrome c oxidase subunit 7C, mitochondrial (Cytochrome c oxidase polypeptide VIIc) |
Synonyms | |
Description | FUNCTION: Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Electrons originating from reduced cytochrome c in the intermembrane space (IMS) are transferred via the dinuclear copper A center (CU(A)) of subunit 2 and heme A of subunit 1 to the active site in subunit 1, a binuclear center (BNC) formed by heme A3 and copper B (CU(B)). The BNC reduces molecular oxygen to 2 water molecules using 4 electrons from cytochrome c in the IMS and 4 protons from the mitochondrial matrix. . FUNCTION: Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Electrons originating from reduced cytochrome c in the intermembrane space (IMS) are transferred via the dinuclear copper A center (CU(A)) of subunit 2 and heme A of subunit 1 to the active site in subunit 1, a binuclear center (BNC) formed by heme A3 and copper B (CU(B)). The BNC reduces molecular oxygen to 2 water molecules using 4 electrons from cytochrome c in the IMS and 4 protons from the mitochondrial matrix. . |
Accessions | D6R9Z7 ENST00000509578.1 ENST00000515763.1 ENST00000247655.4 P15954 |