Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 19 studies | 41% ± 12% | |
lung | 18 studies | 55% ± 19% | |
intestine | 12 studies | 55% ± 24% | |
kidney | 9 studies | 59% ± 16% | |
eye | 9 studies | 46% ± 21% | |
liver | 8 studies | 44% ± 22% | |
brain | 7 studies | 38% ± 12% | |
bone marrow | 7 studies | 32% ± 13% | |
lymph node | 6 studies | 43% ± 17% | |
pancreas | 5 studies | 75% ± 20% | |
uterus | 5 studies | 55% ± 23% | |
placenta | 4 studies | 54% ± 23% | |
prostate | 4 studies | 43% ± 13% | |
breast | 4 studies | 49% ± 11% | |
heart | 3 studies | 31% ± 11% | |
adrenal gland | 3 studies | 49% ± 6% | |
esophagus | 3 studies | 63% ± 28% | |
skin | 3 studies | 47% ± 9% | |
thymus | 3 studies | 62% ± 21% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 4927.53 | 258 / 258 | 100% | 124.84 | 230 / 230 |
esophagus | 100% | 3225.55 | 1445 / 1445 | 100% | 61.85 | 183 / 183 |
kidney | 100% | 5333.43 | 89 / 89 | 100% | 102.17 | 901 / 901 |
liver | 100% | 7242.27 | 226 / 226 | 100% | 218.70 | 406 / 406 |
ovary | 100% | 1656.36 | 180 / 180 | 100% | 100.32 | 430 / 430 |
prostate | 100% | 3906.72 | 245 / 245 | 100% | 169.23 | 502 / 502 |
uterus | 100% | 1932.25 | 170 / 170 | 100% | 118.96 | 459 / 459 |
intestine | 100% | 3584.87 | 966 / 966 | 100% | 150.51 | 526 / 527 |
brain | 100% | 3380.71 | 2635 / 2642 | 100% | 94.70 | 705 / 705 |
skin | 100% | 2784.26 | 1804 / 1809 | 100% | 84.24 | 472 / 472 |
pancreas | 100% | 2028.39 | 327 / 328 | 100% | 96.43 | 178 / 178 |
stomach | 100% | 3795.48 | 359 / 359 | 100% | 120.39 | 285 / 286 |
thymus | 100% | 2535.87 | 651 / 653 | 100% | 88.74 | 604 / 605 |
bladder | 100% | 3110.62 | 21 / 21 | 99% | 136.78 | 501 / 504 |
breast | 100% | 2611.74 | 458 / 459 | 99% | 120.02 | 1110 / 1118 |
lung | 99% | 2138.65 | 571 / 578 | 100% | 77.96 | 1153 / 1155 |
eye | 0% | 0 | 0 / 0 | 100% | 91.47 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 115.93 | 29 / 29 |
muscle | 100% | 7397.40 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2061.54 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 93.04 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 64.66 | 1 / 1 |
adipose | 100% | 2701.66 | 1202 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 2557.00 | 1327 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 8942.91 | 855 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 44% | 1068.03 | 411 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0021548 | Biological process | pons development |
GO_0021794 | Biological process | thalamus development |
GO_0030901 | Biological process | midbrain development |
GO_0006122 | Biological process | mitochondrial electron transport, ubiquinol to cytochrome c |
GO_0021766 | Biological process | hippocampus development |
GO_0045333 | Biological process | cellular respiration |
GO_0021860 | Biological process | pyramidal neuron development |
GO_0021539 | Biological process | subthalamus development |
GO_0021854 | Biological process | hypothalamus development |
GO_0021680 | Biological process | cerebellar Purkinje cell layer development |
GO_0005750 | Cellular component | mitochondrial respiratory chain complex III |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005739 | Cellular component | mitochondrion |
Gene name | UQCRQ |
Protein name | Cytochrome b-c1 complex subunit 8 (Complex III subunit 8) (Complex III subunit VIII) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C) |
Synonyms | |
Description | FUNCTION: Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. The cytochrome b-c1 complex catalyzes electron transfer from ubiquinol to cytochrome c, linking this redox reaction to translocation of protons across the mitochondrial inner membrane, with protons being carried across the membrane as hydrogens on the quinol. In the process called Q cycle, 2 protons are consumed from the matrix, 4 protons are released into the intermembrane space and 2 electrons are passed to cytochrome c. . |
Accessions | ENST00000378670.8 ENST00000378667.1 O14949 ENST00000378665.1 |