Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 19 studies | 43% ± 17% | |
peripheral blood | 17 studies | 37% ± 13% | |
intestine | 12 studies | 37% ± 22% | |
kidney | 9 studies | 39% ± 19% | |
brain | 9 studies | 32% ± 11% | |
eye | 9 studies | 36% ± 17% | |
liver | 8 studies | 41% ± 21% | |
lymph node | 7 studies | 47% ± 16% | |
bone marrow | 6 studies | 41% ± 12% | |
pancreas | 5 studies | 59% ± 25% | |
uterus | 5 studies | 48% ± 16% | |
placenta | 4 studies | 61% ± 20% | |
breast | 4 studies | 50% ± 9% | |
ovary | 3 studies | 45% ± 11% | |
adrenal gland | 3 studies | 38% ± 12% | |
esophagus | 3 studies | 42% ± 19% | |
skin | 3 studies | 52% ± 10% | |
thymus | 3 studies | 69% ± 32% | |
prostate | 3 studies | 35% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 32959.85 | 180 / 180 | 100% | 926.44 | 430 / 430 |
skin | 100% | 32366.47 | 1809 / 1809 | 100% | 1139.66 | 472 / 472 |
uterus | 100% | 26152.22 | 170 / 170 | 100% | 1021.94 | 459 / 459 |
esophagus | 100% | 19435.70 | 1444 / 1445 | 100% | 690.08 | 183 / 183 |
breast | 100% | 17260.09 | 459 / 459 | 100% | 782.41 | 1114 / 1118 |
bladder | 100% | 19244.00 | 21 / 21 | 100% | 768.29 | 502 / 504 |
prostate | 100% | 13275.43 | 245 / 245 | 100% | 377.21 | 500 / 502 |
intestine | 100% | 19139.53 | 965 / 966 | 100% | 563.95 | 525 / 527 |
stomach | 100% | 12697.30 | 358 / 359 | 100% | 541.45 | 285 / 286 |
lung | 100% | 18980.39 | 576 / 578 | 100% | 682.34 | 1151 / 1155 |
brain | 98% | 13256.02 | 2595 / 2642 | 100% | 523.87 | 703 / 705 |
thymus | 100% | 14125.45 | 652 / 653 | 98% | 505.11 | 592 / 605 |
liver | 100% | 12196.89 | 225 / 226 | 95% | 412.37 | 387 / 406 |
adrenal gland | 100% | 14118.92 | 258 / 258 | 94% | 342.52 | 216 / 230 |
pancreas | 94% | 6997.96 | 307 / 328 | 97% | 452.54 | 172 / 178 |
kidney | 99% | 10431.25 | 88 / 89 | 90% | 355.99 | 811 / 901 |
adipose | 100% | 20466.77 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 873.04 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 1211.74 | 29 / 29 |
spleen | 100% | 18224.31 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 922.78 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 1318.76 | 1 / 1 |
blood vessel | 100% | 19165.10 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 12611.33 | 845 / 861 | 0% | 0 | 0 / 0 |
muscle | 96% | 8569.69 | 774 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 89% | 27163.62 | 831 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0000278 | Biological process | mitotic cell cycle |
GO_0007017 | Biological process | microtubule-based process |
GO_0051301 | Biological process | cell division |
GO_0042267 | Biological process | natural killer cell mediated cytotoxicity |
GO_0050807 | Biological process | regulation of synapse organization |
GO_0071895 | Biological process | odontoblast differentiation |
GO_0051225 | Biological process | spindle assembly |
GO_0000226 | Biological process | microtubule cytoskeleton organization |
GO_0030705 | Biological process | cytoskeleton-dependent intracellular transport |
GO_0035578 | Cellular component | azurophil granule lumen |
GO_0005856 | Cellular component | cytoskeleton |
GO_0005576 | Cellular component | extracellular region |
GO_0005874 | Cellular component | microtubule |
GO_0005641 | Cellular component | nuclear envelope lumen |
GO_0045121 | Cellular component | membrane raft |
GO_0072686 | Cellular component | mitotic spindle |
GO_0036464 | Cellular component | cytoplasmic ribonucleoprotein granule |
GO_0032991 | Cellular component | protein-containing complex |
GO_0070062 | Cellular component | extracellular exosome |
GO_0045171 | Cellular component | intercellular bridge |
GO_0005829 | Cellular component | cytosol |
GO_0015630 | Cellular component | microtubule cytoskeleton |
GO_0005737 | Cellular component | cytoplasm |
GO_0044297 | Cellular component | cell body |
GO_0005634 | Cellular component | nucleus |
GO_0019904 | Molecular function | protein domain specific binding |
GO_0032794 | Molecular function | GTPase activating protein binding |
GO_0044877 | Molecular function | protein-containing complex binding |
GO_0005200 | Molecular function | structural constituent of cytoskeleton |
GO_0031625 | Molecular function | ubiquitin protein ligase binding |
GO_0005198 | Molecular function | structural molecule activity |
GO_0005525 | Molecular function | GTP binding |
GO_0042288 | Molecular function | MHC class I protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0005515 | Molecular function | protein binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | TUBB |
Protein name | TUBB protein Tubulin beta chain Tubulin beta chain (Tubulin beta-5 chain) |
Synonyms | hCG_26016 TUBB5 OK/SW-cl.56 |
Description | FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . |
Accessions | Q5ST81 ENST00000412136.5 ENST00000426754.5 ENST00000446385.1 ENST00000432462.6 Q5SU16 Q9BUU9 ENST00000419551.5 ENST00000327892.13 ENST00000422674.6 ENST00000400534.5 ENST00000427480.5 ENST00000437490.5 ENST00000419792.6 ENST00000413547.5 ENST00000420400.5 ENST00000436628.6 ENST00000383564.8 Q96B85 ENST00000444441.1 ENST00000425102.1 ENST00000681435.1 Q5JP53 ENST00000454454.5 Q6P602 ENST00000400530.1 ENST00000396389.5 ENST00000421473.6 ENST00000424734.5 ENST00000454620.1 ENST00000330914.7 ENST00000400531.5 ENST00000425136.5 ENST00000453350.1 ENST00000435546.5 ENST00000436335.5 ENST00000420618.1 ENST00000396384.1 P07437 ENST00000422650.6 |