Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 17 studies | 39% ± 9% | |
lung | 16 studies | 30% ± 10% | |
intestine | 7 studies | 23% ± 6% | |
lymph node | 6 studies | 25% ± 7% | |
pancreas | 4 studies | 56% ± 19% | |
bone marrow | 4 studies | 27% ± 10% | |
uterus | 4 studies | 30% ± 9% | |
breast | 4 studies | 24% ± 6% | |
kidney | 3 studies | 31% ± 9% | |
esophagus | 3 studies | 51% ± 24% | |
liver | 3 studies | 31% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 10436.95 | 1445 / 1445 | 99% | 503.67 | 182 / 183 |
intestine | 100% | 6725.71 | 965 / 966 | 99% | 411.09 | 523 / 527 |
ovary | 100% | 4785.72 | 180 / 180 | 98% | 355.42 | 421 / 430 |
uterus | 100% | 7305.32 | 170 / 170 | 98% | 419.24 | 448 / 459 |
breast | 99% | 4845.01 | 456 / 459 | 98% | 210.20 | 1092 / 1118 |
bladder | 100% | 8439.33 | 21 / 21 | 96% | 323.74 | 486 / 504 |
lung | 99% | 5692.90 | 572 / 578 | 97% | 298.68 | 1120 / 1155 |
adrenal gland | 100% | 8590.89 | 258 / 258 | 96% | 200.79 | 220 / 230 |
pancreas | 98% | 6533.41 | 322 / 328 | 97% | 213.29 | 173 / 178 |
skin | 100% | 13535.96 | 1809 / 1809 | 92% | 235.88 | 436 / 472 |
stomach | 92% | 4332.36 | 329 / 359 | 98% | 407.65 | 281 / 286 |
thymus | 82% | 2154.84 | 535 / 653 | 87% | 121.05 | 525 / 605 |
prostate | 99% | 4717.96 | 242 / 245 | 54% | 41.48 | 269 / 502 |
kidney | 63% | 2295.60 | 56 / 89 | 75% | 104.06 | 675 / 901 |
tonsil | 0% | 0 | 0 / 0 | 100% | 494.33 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 117.81 | 1 / 1 |
blood vessel | 100% | 11986.38 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 99% | 4866.41 | 1196 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 15849.02 | 920 / 929 | 0% | 0 | 0 / 0 |
spleen | 96% | 3551.66 | 232 / 241 | 0% | 0 | 0 / 0 |
heart | 87% | 3404.69 | 748 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 86% | 111.30 | 25 / 29 |
muscle | 71% | 2379.32 | 568 / 803 | 0% | 0 | 0 / 0 |
liver | 22% | 578.90 | 50 / 226 | 32% | 51.64 | 130 / 406 |
eye | 0% | 0 | 0 / 0 | 51% | 43.79 | 41 / 80 |
brain | 4% | 82.28 | 103 / 2642 | 30% | 46.14 | 215 / 705 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0034220 | Biological process | monoatomic ion transmembrane transport |
GO_0006811 | Biological process | monoatomic ion transport |
GO_0019221 | Biological process | cytokine-mediated signaling pathway |
GO_0006935 | Biological process | chemotaxis |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0016020 | Cellular component | membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0015075 | Molecular function | monoatomic ion transmembrane transporter activity |
GO_0005515 | Molecular function | protein binding |
GO_0019956 | Molecular function | chemokine binding |
Gene name | PLP2 |
Protein name | Proteolipid protein 2 (Differentiation-dependent protein A4) (Intestinal membrane A4 protein) |
Synonyms | A4 |
Description | FUNCTION: May play a role in cell differentiation in the intestinal epithelium. |
Accessions | ENST00000376327.6 [Q04941-1] Q04941 ENST00000376322.7 [Q04941-2] |