Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 18 studies | 46% ± 18% | |
peripheral blood | 18 studies | 38% ± 11% | |
intestine | 13 studies | 38% ± 19% | |
brain | 10 studies | 30% ± 9% | |
kidney | 9 studies | 47% ± 12% | |
eye | 9 studies | 40% ± 18% | |
bone marrow | 6 studies | 27% ± 9% | |
pancreas | 5 studies | 61% ± 22% | |
uterus | 5 studies | 48% ± 20% | |
liver | 5 studies | 47% ± 22% | |
lymph node | 5 studies | 46% ± 14% | |
placenta | 4 studies | 48% ± 20% | |
prostate | 4 studies | 37% ± 9% | |
breast | 4 studies | 46% ± 5% | |
adrenal gland | 3 studies | 45% ± 3% | |
esophagus | 3 studies | 54% ± 25% | |
skin | 3 studies | 33% ± 11% | |
thymus | 3 studies | 62% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 4004.74 | 1445 / 1445 | 100% | 160.18 | 183 / 183 |
ovary | 100% | 3508.95 | 180 / 180 | 100% | 255.82 | 430 / 430 |
stomach | 100% | 3297.66 | 359 / 359 | 100% | 157.80 | 286 / 286 |
uterus | 100% | 3519.96 | 170 / 170 | 100% | 216.27 | 459 / 459 |
skin | 100% | 3539.87 | 1808 / 1809 | 100% | 146.40 | 472 / 472 |
kidney | 100% | 5281.22 | 89 / 89 | 100% | 164.92 | 900 / 901 |
brain | 100% | 4088.33 | 2638 / 2642 | 100% | 130.24 | 705 / 705 |
intestine | 100% | 4206.15 | 966 / 966 | 100% | 150.20 | 526 / 527 |
prostate | 100% | 3562.46 | 245 / 245 | 100% | 194.15 | 501 / 502 |
lung | 100% | 3078.85 | 576 / 578 | 100% | 170.17 | 1155 / 1155 |
bladder | 100% | 3595.67 | 21 / 21 | 100% | 166.48 | 502 / 504 |
adrenal gland | 100% | 8435.10 | 258 / 258 | 100% | 207.93 | 229 / 230 |
liver | 100% | 2603.53 | 225 / 226 | 100% | 130.70 | 406 / 406 |
thymus | 100% | 3496.41 | 651 / 653 | 100% | 150.24 | 604 / 605 |
pancreas | 99% | 1991.61 | 326 / 328 | 100% | 133.10 | 178 / 178 |
breast | 100% | 4028.70 | 459 / 459 | 99% | 205.13 | 1111 / 1118 |
adipose | 100% | 3885.69 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 124.58 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 134.04 | 29 / 29 |
muscle | 100% | 8339.30 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3291.87 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 234.97 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 70.31 | 1 / 1 |
blood vessel | 100% | 3730.28 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 8274.49 | 854 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 91% | 2441.33 | 842 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0009060 | Biological process | aerobic respiration |
GO_0006979 | Biological process | response to oxidative stress |
GO_0006120 | Biological process | mitochondrial electron transport, NADH to ubiquinone |
GO_0042776 | Biological process | proton motive force-driven mitochondrial ATP synthesis |
GO_0055085 | Biological process | transmembrane transport |
GO_0032981 | Biological process | mitochondrial respiratory chain complex I assembly |
GO_0045271 | Cellular component | respiratory chain complex I |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0008137 | Molecular function | NADH dehydrogenase (ubiquinone) activity |
Gene name | NDUFB4 |
Protein name | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 (Complex I-B15) (NADH-ubiquinone oxidoreductase B15 subunit) NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 (Complex I-B15) (CI-B15) (NADH-ubiquinone oxidoreductase B15 subunit) |
Synonyms | |
Description | FUNCTION: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. . FUNCTION: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. . FUNCTION: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. . |
Accessions | ENST00000492739.1 C9JXQ9 ENST00000184266.3 [O95168-1] ENST00000461682.1 O95168 ENST00000485064.1 [O95168-2] F2Z3P9 ENST00000491335.1 |