Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 19 studies | 45% ± 12% | |
lung | 18 studies | 53% ± 16% | |
intestine | 12 studies | 47% ± 21% | |
brain | 11 studies | 35% ± 12% | |
kidney | 9 studies | 57% ± 13% | |
eye | 9 studies | 45% ± 19% | |
liver | 7 studies | 42% ± 20% | |
bone marrow | 6 studies | 33% ± 13% | |
lymph node | 6 studies | 48% ± 20% | |
pancreas | 5 studies | 62% ± 22% | |
uterus | 5 studies | 54% ± 23% | |
placenta | 4 studies | 50% ± 25% | |
prostate | 4 studies | 42% ± 10% | |
breast | 4 studies | 50% ± 9% | |
heart | 3 studies | 30% ± 11% | |
adrenal gland | 3 studies | 46% ± 5% | |
esophagus | 3 studies | 53% ± 26% | |
skin | 3 studies | 40% ± 5% | |
thymus | 3 studies | 58% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2825.35 | 1445 / 1445 | 100% | 19.02 | 183 / 183 |
kidney | 100% | 5089.44 | 89 / 89 | 100% | 43.19 | 901 / 901 |
liver | 100% | 2125.36 | 226 / 226 | 100% | 32.96 | 406 / 406 |
ovary | 100% | 1593.28 | 180 / 180 | 100% | 34.84 | 430 / 430 |
thymus | 100% | 4904.39 | 653 / 653 | 100% | 66.62 | 605 / 605 |
uterus | 100% | 1991.25 | 170 / 170 | 100% | 39.74 | 459 / 459 |
brain | 100% | 3643.49 | 2641 / 2642 | 100% | 47.77 | 705 / 705 |
skin | 100% | 2191.20 | 1807 / 1809 | 100% | 42.62 | 472 / 472 |
stomach | 100% | 2316.70 | 359 / 359 | 100% | 32.42 | 285 / 286 |
intestine | 100% | 3033.14 | 966 / 966 | 100% | 39.97 | 525 / 527 |
bladder | 100% | 2433.29 | 21 / 21 | 99% | 42.39 | 501 / 504 |
lung | 99% | 2062.15 | 574 / 578 | 100% | 29.59 | 1155 / 1155 |
prostate | 100% | 2356.13 | 245 / 245 | 99% | 36.29 | 498 / 502 |
adrenal gland | 100% | 3026.83 | 258 / 258 | 99% | 40.78 | 228 / 230 |
breast | 100% | 2119.83 | 459 / 459 | 99% | 37.69 | 1107 / 1118 |
pancreas | 98% | 1198.95 | 323 / 328 | 100% | 32.50 | 178 / 178 |
adipose | 100% | 2222.47 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 55.43 | 29 / 29 |
muscle | 100% | 5234.87 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2296.54 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 26.89 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 25.31 | 1 / 1 |
blood vessel | 99% | 2074.12 | 1328 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 6367.36 | 855 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 27.41 | 79 / 80 |
peripheral blood | 56% | 892.61 | 523 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0009060 | Biological process | aerobic respiration |
GO_0006120 | Biological process | mitochondrial electron transport, NADH to ubiquinone |
GO_0042776 | Biological process | proton motive force-driven mitochondrial ATP synthesis |
GO_0055085 | Biological process | transmembrane transport |
GO_0032981 | Biological process | mitochondrial respiratory chain complex I assembly |
GO_0045271 | Cellular component | respiratory chain complex I |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0008137 | Molecular function | NADH dehydrogenase (ubiquinone) activity |
Gene name | NDUFB2 |
Protein name | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (CI-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit) NADH:ubiquinone oxidoreductase subunit B2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (Complex I-AGGG) (NADH-ubiquinone oxidoreductase AGGG subunit) |
Synonyms | tcag7.347 WUGSC:H_DJ0726N20.gs.b hCG_40132 |
Description | FUNCTION: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. . FUNCTION: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. . FUNCTION: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. . FUNCTION: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. . FUNCTION: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. . FUNCTION: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. . FUNCTION: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. . |
Accessions | C9IZW8 H7C5B8 C9JXM4 ENST00000471136.5 ENST00000476470.5 ENST00000476279.5 ENST00000465506.5 ENST00000476181.5 C9IZZ2 ENST00000472695.5 ENST00000460088.5 ENST00000247866.9 ENST00000482954.5 ENST00000461457.1 O95178 ENST00000475276.1 C9JRV4 Q9Y6T4 ENST00000464566.5 A4D1T5 F8WCJ6 |